EnhancerDB
  1. Home
  2. Gene
  3. PDGFRB[ENSG00000113721.9]
Enhancers that regulate PDGFRB[ENSG00000113721.9]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 149434745 149438895 enh22708 149535435 96540
Placenta
chr5 149442364 149446560 enh102783 149535435 88875
Bone (Osteoblast)
chr5 149445526 149445798 vista49635 149535435 89637
VISTA
chr5 149456060 149456090 vista49636 149535435 79345
VISTA
chr5 149480485 149491755 enh22709 149535435 43680
Brain (SK-N-MC) Large Intestine Placenta Peripheral Blood (MM.1S) Lung (PC-9) Thymus
chr5 149503243 149503437 vista49637 149535435 31998
VISTA
chr5 149504465 149514577 enh22710 149535435 20858
Placenta Bone (Osteoblast) Heart
chr5 149515023 149530526 enh22711 149535435 4909
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Lung (A549) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr5 149518246 149518623 vista49638 149535435 16812
VISTA
chr5 149522462 149523132 vista49639 149535435 12303
VISTA
chr5 149525289 149525473 vista49640 149535435 9962
VISTA
chr5 149533722 149534084 vista49641 149535435 1351
VISTA
chr5 149550825 149562044 enh22712 149535435 15390
Pancreas Placenta Large Intestine Heart
chr5 149588179 149596505 enh38516 149535435 52744
Astrocyte Bone (Osteoblast) Pancreas Uterus Stomach
chr5 149613045 149617395 enh100432 149535435 77610
Uterus Kidney
Transcript facotrs that regulate PDGFRB[ENSG00000113721.9]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr5 149530465 149530471 ZNF354C JASPAR yes 149535435 4964 66864182
chr5 149530471 149530481 SP1 JASPAR yes 149535435 4954 66864183
chr5 149530488 149530496 EHF JASPAR yes 149535435 4939 66864184
chr5 149530489 149530510 ZNF263 JASPAR yes 149535435 4925 66864185
chr5 149530493 149530514 ZNF263 JASPAR yes 149535435 4921 66864186
chr5 149530514 149530519 GATA1 TRANSFAC yes 149535435 4916 66864187
chr5 149533743 149533753 NFKB1 JASPAR yes 149535435 1682 70738114
chr5 149533743 149533753 RELA JASPAR yes 149535435 1682 70738115
chr5 149533743 149533753 REL JASPAR yes 149535435 1682 70738116
chr5 149533747 149533752 GATA2 JASPAR yes 149535435 1683 70738117
chr5 149533755 149533776 ZNF263 JASPAR yes 149535435 1659 70738118
chr5 149533758 149533776 MAFF JASPAR yes 149535435 1659 70738119
chr5 149533760 149533775 MAFK JASPAR yes 149535435 1660 70738120
chr5 149533760 149533781 MAFG JASPAR yes 149535435 1654 70738121
chr5 149533768 149533776 EHF JASPAR yes 149535435 1659 70738122
chr5 149533773 149533788 HSF1 JASPAR yes 149535435 1647 70738123
chr5 149533774 149533778 LFA1 TRANSFAC yes 149535435 1657 70738124
chr5 149533774 149533787 HSF2 JASPAR yes 149535435 1648 70738125
chr5 149533775 149533785 TEAD4 JASPAR yes 149535435 1650 70738126
chr5 149533776 149533784 TEAD3 JASPAR yes 149535435 1651 70738127
chr5 149533784 149533798 SPI1 JASPAR yes 149535435 1637 70738128
chr5 149533785 149533806 ZNF263 JASPAR yes 149535435 1629 70738129
chr5 149533790 149533795 ETS2 TRANSFAC yes 149535435 1640 70738130
chr5 149533793 149533804 E2F6 JASPAR yes 149535435 1631 70738131
chr5 149533795 149533803 SP1 TRANSFAC yes 149535435 1632 70738132
chr5 149533797 149533803 MAZ TRANSFAC yes 149535435 1632 70738133
chr5 149533801 149533805 LFA1 TRANSFAC yes 149535435 1630 70738134
chr5 149533807 149533816 HIC2 JASPAR yes 149535435 1619 70738135
chr5 149533828 149533838 TEAD1 JASPAR yes 149535435 1597 70738136
chr5 149533828 149533838 TEAD4 JASPAR yes 149535435 1597 70738137
chr5 149533829 149533837 TEAD3 JASPAR yes 149535435 1598 70738138
chr5 149533832 149533837 ETS2 TRANSFAC yes 149535435 1598 70738139
chr5 149533832 149533849 BCL6B JASPAR yes 149535435 1586 70738140
chr5 149533833 149533848 STAT1 JASPAR yes 149535435 1587 70738141
chr5 149533835 149533846 STAT1 JASPAR yes 149535435 1589 70738142
chr5 149533835 149533846 STAT3 JASPAR yes 149535435 1589 70738143
chr5 149533836 149533844 STAT6 TRANSFAC yes 149535435 1591 70738144
chr5 149533838 149533854 ZNF143 JASPAR yes 149535435 1581 70738145
chr5 149533848 149533866 NFYA JASPAR yes 149535435 1569 70738146
chr5 149533856 149533870 E2F7 JASPAR yes 149535435 1565 70738147
chr5 149533858 149533869 E2F1 JASPAR yes 149535435 1566 70738148
chr5 149533859 149533870 E2F4 JASPAR yes 149535435 1565 70738149
chr5 149533859 149533870 E2F6 JASPAR yes 149535435 1565 70738150
chr5 149533860 149533865 SP1 TRANSFAC yes 149535435 1570 70738151
chr5 149533868 149533884 E2F2 JASPAR yes 149535435 1551 70738152
chr5 149533893 149533897 LFA1 TRANSFAC yes 149535435 1538 70738153
chr5 149533900 149533910 RELA JASPAR yes 149535435 1525 70738154
chr5 149533900 149533910 REL JASPAR yes 149535435 1525 70738155
chr5 149533900 149533911 NFKB1 JASPAR yes 149535435 1524 70738156
chr5 149533926 149533935 NKX3-2 JASPAR yes 149535435 1500 70738157
chr5 149533985 149533989 TEAD2 TRANSFAC yes 149535435 1446 70738158
chr5 149533985 149533990 TBP TRANSFAC yes 149535435 1445 70738159
chr5 149533985 149533991 TFIID TRANSFAC yes 149535435 1444 70738160
chr5 149533986 149534000 SPIC JASPAR yes 149535435 1435 70738161
chr5 149533992 149534007 FOXP1 JASPAR yes 149535435 1428 70738162
chr5 149534008 149534023 TFAP2A JASPAR yes 149535435 1412 70738163
chr5 149534033 149534037 YY1 TRANSFAC yes 149535435 1398 70738164
chr5 149534039 149534052 JUN JASPAR yes 149535435 1383 70738165
chr5 149534049 149534060 HOXC13 JASPAR yes 149535435 1375 70738166
chr5 149534068 149534073 MYC TRANSFAC yes 149535435 1362 70738167
SNPs associated with PDGFRB[ENSG00000113721.9], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 150484527 rs1559124 G C 949092 Esophagus 0.19146 8618375
chr5 149380465 rs73271693 C T 112935 Esophagus 0.164952 8612190
chr5 149592960 rs57222335 T C 57525 Heart 0.334661 8613232
chr5 149524113 rs3776077 C T 0 Pancreas 0.342948 8612897
chr5 148917992 rs7719315 T C 575408 Ovary 0.263684 8608608
chr5 149589325 rs12653451 T C 53890 Thyroid 0.189215 8613175
chr5 148547575 rs77431348 A G 945825 Lung 0.125936 8605949
Details of PDGFRB[ENSG00000113721.9]
Back to top
Genomic Location chr5:149493400-149535435[-]
TSS 149535435
Gene Name PDGFRB
Ensembl ID ENSG00000113721.9
ENTREZID 5159
Uniprot
Q59F04
P09619
Protein Name
Platelet-derived growth factor receptor beta
Expression levels of PDGFRB[ENSG00000113721.9]
Back to top