EnhancerDB
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Enhancers that regulate SMG7[ENSG00000116698.16]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 183331185 183346275 enh12452 183441351 95076
Thyroid Placenta Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr1 183359049 183363279 enh43096 183441351 78072
Muscle (Myotube)
chr1 183370685 183382515 enh64137 183441351 58836
Prostate (PC-3) Brain (SK-N-MC) Lung (PC-9) Neural Stem Cells (H9) Heart
chr1 183386078 183386213 vista4170 183441351 55138
VISTA
chr1 183397765 183404070 enh79276 183441351 37281
Prostate (PC-3) Prostate (RWPE1) Lung (PC-9)
chr1 183410205 183415675 enh79277 183441351 25676
Prostate (PC-3) Lung (PC-9)
chr1 183420525 183425875 enh12453 183441351 15476
Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Epithelial (MCF-7)
chr1 183426645 183433315 enh12454 183441351 8036
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9)
chr1 183436030 183436225 vista4171 183441351 5126
VISTA
chr1 183445284 183453635 enh802 183441351 3933
Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr1 183458225 183469835 enh803 183441351 16874
Brain (SK-N-MC) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Thymus
chr1 183526698 183527308 vista4172 183441351 85347
VISTA
Transcript facotrs that regulate SMG7[ENSG00000116698.16]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 183445288 183445293 ETS2 TRANSFAC yes 183441351 3937 33684792
chr1 183445294 183445298 YY1 TRANSFAC yes 183441351 3943 33684793
chr1 183445308 183445323 MEF2C JASPAR yes 183441351 3957 33684794
chr1 183445360 183445375 MAFK JASPAR yes 183441351 4009 33684795
chr1 183445367 183445387 RREB1 JASPAR yes 183441351 4016 33684796
chr1 183445370 183445390 RREB1 JASPAR yes 183441351 4019 33684797
chr1 183445371 183445391 RREB1 JASPAR yes 183441351 4020 33684798
chr1 183445379 183445389 ZNF740 JASPAR yes 183441351 4028 33684799
chr1 183445380 183445390 ZNF740 JASPAR yes 183441351 4029 33684800
chr1 183445391 183445401 MYF6 JASPAR yes 183441351 4040 33684801
chr1 183445393 183445402 SOX9 JASPAR yes 183441351 4042 33684802
chr1 183445395 183445404 SRY JASPAR yes 183441351 4044 33684803
chr1 183445396 183445411 ESR2 JASPAR yes 183441351 4045 33684804
chr1 183445401 183445414 NR2F1 JASPAR yes 183441351 4050 33684805
chr1 183445403 183445414 ESRRA JASPAR yes 183441351 4052 33684806
chr1 183445403 183445414 ESRRB JASPAR yes 183441351 4052 33684807
chr1 183445404 183445412 NR4A2 JASPAR yes 183441351 4053 33684808
chr1 183445405 183445415 RORA JASPAR yes 183441351 4054 33684809
chr1 183445436 183445442 SOX10 JASPAR yes 183441351 4085 33684810
chr1 183445451 183445471 TP53 JASPAR yes 183441351 4100 33684811
chr1 183445454 183445472 TP53 JASPAR yes 183441351 4103 33684812
chr1 183445457 183445468 NFE2L2 JASPAR yes 183441351 4106 33684813
chr1 183445463 183445467 LFA1 TRANSFAC yes 183441351 4112 33684814
chr1 183445463 183445478 HNF1A JASPAR yes 183441351 4112 33684815
chr1 183445474 183445490 RFX2 JASPAR yes 183441351 4123 33684816
chr1 183445474 183445490 RFX4 JASPAR yes 183441351 4123 33684817
chr1 183445475 183445494 RFX2 JASPAR yes 183441351 4124 33684818
chr1 183445504 183445518 POU1F1 JASPAR yes 183441351 4153 33684819
chr1 183445505 183445518 POU2F2 JASPAR yes 183441351 4154 33684820
chr1 183445572 183445577 MYB TRANSFAC yes 183441351 4221 33684821
chr1 183445580 183445585 SP1 TRANSFAC yes 183441351 4229 33684822
chr1 183445588 183445593 SP1 TRANSFAC yes 183441351 4237 33684823
chr1 183445605 183445617 YY1 JASPAR yes 183441351 4254 33684824
chr1 183445608 183445614 YY1 JASPAR yes 183441351 4257 33684825
chr1 183445625 183445629 ESR1 TRANSFAC yes 183441351 4274 33684826
chr1 183445629 183445635 HiNF-A TRANSFAC yes 183441351 4278 33684827
chr1 183445637 183445643 GATA3 JASPAR yes 183441351 4286 33684828
chr1 183445663 183445674 CDX2 JASPAR yes 183441351 4312 33684829
chr1 183445665 183445669 H1TF2 TRANSFAC yes 183441351 4314 33684830
chr1 183445665 183445669 NFE TRANSFAC yes 183441351 4314 33684831
chr1 183445665 183445669 SRF TRANSFAC yes 183441351 4314 33684832
chr1 183445665 183445675 HOXA13 JASPAR yes 183441351 4314 33684833
chr1 183445665 183445675 HOXB13 JASPAR yes 183441351 4314 33684834
chr1 183445665 183445675 HOXD13 JASPAR yes 183441351 4314 33684835
chr1 183445682 183445697 LEF1 JASPAR yes 183441351 4331 33684836
chr1 183445709 183445720 CDX2 JASPAR yes 183441351 4358 33684837
chr1 183445710 183445721 HOXA10 JASPAR yes 183441351 4359 33684838
chr1 183445711 183445721 HOXD11 JASPAR yes 183441351 4360 33684839
chr1 183445711 183445721 HOXD13 JASPAR yes 183441351 4360 33684840
chr1 183445711 183445726 MEF2C JASPAR yes 183441351 4360 33684841
chr1 183445712 183445727 MEF2A JASPAR yes 183441351 4361 33684842
chr1 183445713 183445717 TEAD2 TRANSFAC yes 183441351 4362 33684843
chr1 183445713 183445718 TBP TRANSFAC yes 183441351 4362 33684844
chr1 183445713 183445719 TFIID TRANSFAC yes 183441351 4362 33684845
chr1 183445713 183445725 MEF2A JASPAR yes 183441351 4362 33684846
chr1 183445713 183445725 MEF2B JASPAR yes 183441351 4362 33684847
chr1 183445713 183445725 MEF2D JASPAR yes 183441351 4362 33684848
chr1 183445714 183445724 MEF2A JASPAR yes 183441351 4363 33684849
chr1 183445722 183445743 ZNF263 JASPAR yes 183441351 4371 33684850
chr1 183445727 183445741 TCF7L2 JASPAR yes 183441351 4376 33684851
chr1 183445727 183445742 LEF1 JASPAR yes 183441351 4376 33684852
chr1 183445731 183445737 TCF4 TRANSFAC yes 183441351 4380 33684853
chr1 183445735 183445740 ETS2 TRANSFAC yes 183441351 4384 33684854
chr1 183445747 183445751 NFE TRANSFAC yes 183441351 4396 33684855
chr1 183445747 183445752 GATA1 TRANSFAC yes 183441351 4396 33684856
chr1 183445747 183445753 GATA3 JASPAR yes 183441351 4396 33684857
chr1 183445777 183445786 THAP1 JASPAR yes 183441351 4426 33684858
chr1 183445780 183445784 LFA1 TRANSFAC yes 183441351 4429 33684859
chr1 183445782 183445793 FLI1 JASPAR yes 183441351 4431 33684860
chr1 183445790 183445795 GATA2 JASPAR yes 183441351 4439 33684861
chr1 183445790 183445808 IRF2 JASPAR yes 183441351 4439 33684862
chr1 183445791 183445807 SOX4 JASPAR yes 183441351 4440 33684863
chr1 183445793 183445804 PHOX2A JASPAR yes 183441351 4442 33684864
chr1 183445793 183445804 PROP1 JASPAR yes 183441351 4442 33684865
chr1 183445803 183445809 TCF4 TRANSFAC yes 183441351 4452 33684866
chr1 183445803 183445815 FOXI1 JASPAR yes 183441351 4452 33684867
chr1 183445815 183445833 NR3C1 JASPAR yes 183441351 4464 33684868
chr1 183445818 183445826 FOXC1 JASPAR yes 183441351 4467 33684869
chr1 183445820 183445827 NKX3-1 JASPAR yes 183441351 4469 33684870
chr1 183445823 183445828 GATA1 TRANSFAC yes 183441351 4472 33684871
chr1 183445843 183445855 PROX1 JASPAR yes 183441351 4492 33684872
chr1 183445878 183445884 LEF1 TRANSFAC yes 183441351 4527 33684873
chr1 183445878 183445884 SOX10 JASPAR yes 183441351 4527 33684874
chr1 183445889 183445904 MEF2C JASPAR yes 183441351 4538 33684875
chr1 183445890 183445905 MEF2A JASPAR yes 183441351 4539 33684876
chr1 183445891 183445895 TEAD2 TRANSFAC yes 183441351 4540 33684877
chr1 183445891 183445896 TBP TRANSFAC yes 183441351 4540 33684878
chr1 183445891 183445897 TFIID TRANSFAC yes 183441351 4540 33684879
chr1 183445891 183445902 FOXC1 JASPAR yes 183441351 4540 33684880
chr1 183445891 183445903 FOXC2 JASPAR yes 183441351 4540 33684881
chr1 183445891 183445903 MEF2A JASPAR yes 183441351 4540 33684882
chr1 183445891 183445903 MEF2B JASPAR yes 183441351 4540 33684883
chr1 183445891 183445903 MEF2D JASPAR yes 183441351 4540 33684884
chr1 183445892 183445902 MEF2A JASPAR yes 183441351 4541 33684885
chr1 183445894 183445906 IRF1 JASPAR yes 183441351 4543 33684886
chr1 183445897 183445908 FOXC1 JASPAR yes 183441351 4546 33684887
chr1 183445937 183445940 MYB TRANSFAC yes 183441351 4586 33684888
chr1 183445945 183445961 POU4F2 JASPAR yes 183441351 4594 33684889
chr1 183445947 183445958 HOXA10 JASPAR yes 183441351 4596 33684890
chr1 183445948 183445957 CDX1 JASPAR yes 183441351 4597 33684891
chr1 183445948 183445959 CDX2 JASPAR yes 183441351 4597 33684892
chr1 183445952 183445964 POU2F1 JASPAR yes 183441351 4601 33684893
chr1 183445961 183445966 MYB TRANSFAC yes 183441351 4610 33684894
chr1 183445977 183445998 IRF1 JASPAR yes 183441351 4626 33684895
chr1 183445979 183445994 PRDM1 JASPAR yes 183441351 4628 33684896
chr1 183445980 183445984 YY1 TRANSFAC yes 183441351 4629 33684897
chr1 183445980 183445994 SPIC JASPAR yes 183441351 4629 33684898
chr1 183445981 183445995 IRF7 JASPAR yes 183441351 4630 33684899
chr1 183445981 183445996 IRF9 JASPAR yes 183441351 4630 33684900
chr1 183445993 183446003 HOXC10 JASPAR yes 183441351 4642 33684901
chr1 183445993 183446003 HOXD11 JASPAR yes 183441351 4642 33684902
chr1 183445993 183446004 HOXC11 JASPAR yes 183441351 4642 33684903
chr1 183445994 183446003 CDX1 JASPAR yes 183441351 4643 33684904
chr1 183445994 183446005 CDX2 JASPAR yes 183441351 4643 33684905
chr1 183446006 183446012 TCF4 TRANSFAC yes 183441351 4655 33684906
chr1 183446023 183446036 EOMES JASPAR yes 183441351 4672 33684907
chr1 183446025 183446035 TBR1 JASPAR yes 183441351 4674 33684908
chr1 183446025 183446036 TBX20 JASPAR yes 183441351 4674 33684909
chr1 183446025 183446036 TBX2 JASPAR yes 183441351 4674 33684910
chr1 183446026 183446036 TBX21 JASPAR yes 183441351 4675 33684911
chr1 183446027 183446035 TBX15 JASPAR yes 183441351 4676 33684912
chr1 183446027 183446035 TBX1 JASPAR yes 183441351 4676 33684913
chr1 183446027 183446035 TBX4 JASPAR yes 183441351 4676 33684914
chr1 183446027 183446035 TBX5 JASPAR yes 183441351 4676 33684915
chr1 183446039 183446045 JUN TRANSFAC yes 183441351 4688 33684916
chr1 183446041 183446056 PRDM1 JASPAR yes 183441351 4690 33684917
chr1 183446058 183446063 MYB TRANSFAC yes 183441351 4707 33684918
chr1 183446071 183446075 YY1 TRANSFAC yes 183441351 4720 33684919
chr1 183446074 183446086 INSM1 JASPAR yes 183441351 4723 33684920
chr1 183446076 183446086 GCM2 JASPAR yes 183441351 4725 33684921
chr1 183446076 183446087 GCM1 JASPAR yes 183441351 4725 33684922
chr1 183446079 183446100 ZNF263 JASPAR yes 183441351 4728 33684923
chr1 183446080 183446097 RXRA JASPAR yes 183441351 4729 33684924
chr1 183446097 183446102 GATA2 JASPAR yes 183441351 4746 33684925
chr1 183446107 183446116 ZEB1 JASPAR yes 183441351 4756 33684926
chr1 183446116 183446120 TEAD2 TRANSFAC yes 183441351 4765 33684927
chr1 183446134 183446149 SOX21 JASPAR yes 183441351 4783 33684928
chr1 183446142 183446146 YY1 TRANSFAC yes 183441351 4791 33684929
chr1 183446146 183446167 IRF1 JASPAR yes 183441351 4795 33684930
chr1 183446150 183446165 PRDM1 JASPAR yes 183441351 4799 33684931
chr1 183446150 183446165 STAT2 JASPAR yes 183441351 4799 33684932
chr1 183446152 183446173 IRF1 JASPAR yes 183441351 4801 33684933
chr1 183446160 183446170 NFATC3 JASPAR yes 183441351 4809 33684934
chr1 183446164 183446178 POU1F1 JASPAR yes 183441351 4813 33684935
chr1 183446165 183446177 POU3F1 JASPAR yes 183441351 4814 33684936
chr1 183446165 183446177 POU3F2 JASPAR yes 183441351 4814 33684937
chr1 183446165 183446178 POU3F3 JASPAR yes 183441351 4814 33684938
chr1 183446166 183446178 POU2F1 JASPAR yes 183441351 4815 33684939
chr1 183446167 183446176 POU3F4 JASPAR yes 183441351 4816 33684940
chr1 183446167 183446176 POU5F1B JASPAR yes 183441351 4816 33684941
chr1 183446169 183446172 MYB TRANSFAC yes 183441351 4818 33684942
chr1 183446183 183446190 NFATC2 JASPAR yes 183441351 4832 33684943
chr1 183446184 183446205 ZNF263 JASPAR yes 183441351 4833 33684944
chr1 183446187 183446208 ZNF263 JASPAR yes 183441351 4836 33684945
chr1 183446200 183446205 ETS2 TRANSFAC yes 183441351 4849 33684946
chr1 183446227 183446241 TCF7L2 JASPAR yes 183441351 4876 33684947
chr1 183446227 183446242 LEF1 JASPAR yes 183441351 4876 33684948
chr1 183446245 183446266 ZNF263 JASPAR yes 183441351 4894 33684949
chr1 183446247 183446261 SPIC JASPAR yes 183441351 4896 33684950
chr1 183446291 183446301 RORA JASPAR yes 183441351 4940 33684951
chr1 183446291 183446311 TP63 JASPAR yes 183441351 4940 33684952
chr1 183446296 183446300 ESR1 TRANSFAC yes 183441351 4945 33684953
chr1 183446305 183446316 CDX2 JASPAR yes 183441351 4954 33684954
chr1 183446309 183446313 TEAD2 TRANSFAC yes 183441351 4958 33684955
chr1 183446309 183446314 TBP TRANSFAC yes 183441351 4958 33684956
chr1 183446309 183446315 TFIID TRANSFAC yes 183441351 4958 33684957
chr1 183446320 183446332 PKNOX2 JASPAR yes 183441351 4969 33684958
chr1 183446321 183446330 SNAI2 JASPAR yes 183441351 4970 33684959
chr1 183446321 183446331 ID4 JASPAR yes 183441351 4970 33684960
chr1 183446321 183446331 TCF3 JASPAR yes 183441351 4970 33684961
chr1 183446321 183446331 TCF4 JASPAR yes 183441351 4970 33684962
chr1 183446345 183446357 YY1 JASPAR yes 183441351 4994 33684963
SNPs associated with SMG7[ENSG00000116698.16], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 183209079 rs2477437 C T 232272 Esophagus 0.121845 779091
chr1 183550475 rs35734725 A C 0 Esophagus 0.00019996 781136
chr1 183450622 rs2702177 G C 0 Heart 0.000621807 780858
chr1 183553560 rs12740417 C T 0 Breast 0.408646 781172
chr1 183360666 rs72503121 T TA 80685 Ovary 0.240323 780260
chr1 183463134 rs4047762 C T 0 Uterus 0.0979888 780942
chr1 183425886 rs9425303 T A 15465 Stomach 0.0564397 780675
chr1 183439483 rs2275675 C T 1868 Adrenal 0.000433244 780756
Details of SMG7[ENSG00000116698.16]
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Genomic Location chr1:183441351-183567381[+]
TSS 183441351
Gene Name SMG7
Ensembl ID ENSG00000116698.16
ENTREZID 9887
Uniprot
Q6TV06
E9PD50
Q92540
Protein Name
Breast cancer-associated antigen SGA-56M
Protein SMG7
Expression levels of SMG7[ENSG00000116698.16]
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