EnhancerDB
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Enhancers that regulate PRDM2[ENSG00000116731.18]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 13924305 13933435 enh26537 14026693 93258
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (Myotube) Heart
chr1 13931629 13932064 vista426 14026693 94629
VISTA
chr1 13941685 13957555 enh26538 14026693 69138
Astrocyte Prostate (PC-3) Uterus Stomach
chr1 13949833 13950153 vista427 14026693 76540
VISTA
chr1 13965601 13971644 enh42888 14026693 55049
Muscle (Myotube) Peripheral Blood (MM.1S) Blood (OCI-LY7)
chr1 13975725 13981015 enh78954 14026693 45678
Prostate (PC-3)
chr1 13986085 13996475 enh68 14026693 30218
Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Muscle (A673) Blood (Karpas-422) Spleen Uterus Thymus Stomach
chr1 14007045 14016214 enh69 14026693 10479
Blood (OCI-LY7) Prostate (RWPE1) Peripheral Blood (MM.1S) Blood (Karpas-422)
chr1 14027926 14028325 vista428 14026693 1233
VISTA
chr1 14029077 14029879 vista429 14026693 2384
VISTA
chr1 14033225 14041771 enh49656 14026693 6532
Large Intestine Blood (GM12878)
chr1 14048389 14054688 enh26539 14026693 21696
Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (T-cell)
chr1 14054762 14055166 vista430 14026693 28069
VISTA
chr1 14074185 14093275 enh70 14026693 47492
Skin (Keratinocyte) Prostate (PC-3) Esophagus Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr1 14087510 14087640 vista431 14026693 60817
VISTA
chr1 14106865 14111015 enh26540 14026693 80172
Astrocyte
chr1 14116924 14130548 enh11518 14026693 90231
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript facotrs that regulate PRDM2[ENSG00000116731.18]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 14026360 14028272 POLR2A UCSC Txn Factor no Conserved 14026693 333 107802137
chr1 14027956 14027962 TBP TRANSFAC yes 14026693 1263 118234094
chr1 14027971 14027979 FEV JASPAR yes 14026693 1278 118234095
chr1 14027974 14027987 POU2F2 JASPAR yes 14026693 1281 118234096
chr1 14027974 14027988 POU1F1 JASPAR yes 14026693 1281 118234097
chr1 14027975 14027986 FOXB1 JASPAR yes 14026693 1282 118234098
chr1 14027975 14027987 POU3F1 JASPAR yes 14026693 1282 118234099
chr1 14027975 14027987 POU3F2 JASPAR yes 14026693 1282 118234100
chr1 14027975 14027988 POU3F3 JASPAR yes 14026693 1282 118234101
chr1 14027976 14027988 POU2F1 JASPAR yes 14026693 1283 118234102
chr1 14027977 14027986 POU3F4 JASPAR yes 14026693 1284 118234103
chr1 14027977 14027986 POU5F1B JASPAR yes 14026693 1284 118234104
chr1 14027978 14027986 FOXL1 JASPAR yes 14026693 1285 118234105
chr1 14027989 14028010 ZNF263 JASPAR yes 14026693 1296 118234106
chr1 14027995 14028001 PEA3 TRANSFAC yes 14026693 1302 118234107
chr1 14028012 14028016 NFE TRANSFAC yes 14026693 1319 118234108
chr1 14028018 14028032 SPIC JASPAR yes 14026693 1325 118234109
chr1 14028055 14028059 H4TF2 TRANSFAC yes 14026693 1362 118234110
chr1 14028063 14028069 NFE2 TRANSFAC yes 14026693 1370 118234111
chr1 14028081 14028091 ELK1 JASPAR yes 14026693 1388 118234112
chr1 14028081 14028091 ERG JASPAR yes 14026693 1388 118234113
chr1 14028081 14028091 ETV5 JASPAR yes 14026693 1388 118234114
chr1 14028081 14028091 FEV JASPAR yes 14026693 1388 118234115
chr1 14028081 14028091 FLI1 JASPAR yes 14026693 1388 118234116
chr1 14028082 14028091 ELK4 JASPAR yes 14026693 1389 118234117
chr1 14028083 14028089 ETS1 JASPAR yes 14026693 1390 118234118
chr1 14028083 14028089 SPI1 JASPAR yes 14026693 1390 118234119
chr1 14028083 14028093 ELK1 JASPAR yes 14026693 1390 118234120
chr1 14028092 14028095 MYB TRANSFAC yes 14026693 1399 118234121
chr1 14028094 14028110 NFYA JASPAR yes 14026693 1401 118234122
chr1 14028097 14028112 NFYB JASPAR yes 14026693 1404 118234123
chr1 14028108 14028121 POU2F2 JASPAR yes 14026693 1415 118234124
chr1 14028133 14028150 RARA JASPAR yes 14026693 1440 118234125
chr1 14028133 14028150 RXRA JASPAR yes 14026693 1440 118234126
chr1 14028142 14028153 ESRRA JASPAR yes 14026693 1449 118234127
chr1 14028142 14028153 ESRRB JASPAR yes 14026693 1449 118234128
chr1 14028144 14028154 RORA JASPAR yes 14026693 1451 118234129
chr1 14028144 14028158 NR2F1 JASPAR yes 14026693 1451 118234130
chr1 14028158 14028162 YY1 TRANSFAC yes 14026693 1465 118234131
chr1 14028160 14028170 HOXD13 JASPAR yes 14026693 1467 118234132
chr1 14028160 14028171 HOXA10 JASPAR yes 14026693 1467 118234133
chr1 14028177 14028181 YY1 TRANSFAC yes 14026693 1484 118234134
chr1 14028187 14028197 NFATC3 JASPAR yes 14026693 1494 118234135
chr1 14028187 14028199 FOXC2 JASPAR yes 14026693 1494 118234136
chr1 14028189 14028197 FOXO3 JASPAR yes 14026693 1496 118234137
chr1 14028193 14028207 ONECUT2 JASPAR yes 14026693 1500 118234138
chr1 14028193 14028207 ONECUT3 JASPAR yes 14026693 1500 118234139
chr1 14028202 14028223 IRF1 JASPAR yes 14026693 1509 118234140
chr1 14028208 14028229 IRF1 JASPAR yes 14026693 1515 118234141
chr1 14028210 14028225 IRF9 JASPAR yes 14026693 1517 118234142
chr1 14028212 14028227 STAT2 JASPAR yes 14026693 1519 118234143
chr1 14028213 14028225 IRF1 JASPAR yes 14026693 1520 118234144
chr1 14028223 14028236 POU2F2 JASPAR yes 14026693 1530 118234145
chr1 14028223 14028237 POU1F1 JASPAR yes 14026693 1530 118234146
chr1 14028224 14028236 POU3F1 JASPAR yes 14026693 1531 118234147
chr1 14028224 14028236 POU3F2 JASPAR yes 14026693 1531 118234148
chr1 14028224 14028237 POU3F3 JASPAR yes 14026693 1531 118234149
chr1 14028225 14028229 YY1 TRANSFAC yes 14026693 1532 118234150
chr1 14028225 14028237 POU2F1 JASPAR yes 14026693 1532 118234151
chr1 14028226 14028235 POU3F4 JASPAR yes 14026693 1533 118234152
chr1 14028226 14028235 POU5F1B JASPAR yes 14026693 1533 118234153
chr1 14028226 14028240 IRF7 JASPAR yes 14026693 1533 118234154
chr1 14028231 14028235 YY1 TRANSFAC yes 14026693 1538 118234155
chr1 14028251 14028266 FOXP1 JASPAR yes 14026693 1558 118234156
chr1 14028264 14028277 ZBTB18 JASPAR yes 14026693 1571 118234157
chr1 14028271 14028283 IRF1 JASPAR yes 14026693 1578 118234158
chr1 14028271 14028286 IRF9 JASPAR yes 14026693 1578 118234159
chr1 14028283 14028288 MYB TRANSFAC yes 14026693 1590 118234160
chr1 14028300 14028304 YY1 TRANSFAC yes 14026693 1607 118234161
chr1 14028303 14028312 NKX2-8 JASPAR yes 14026693 1610 118234162
chr1 14028303 14028313 NKX2-3 JASPAR yes 14026693 1610 118234163
chr1 14028304 14028312 ISL2 JASPAR yes 14026693 1611 118234164
chr1 14028304 14028313 NKX3-2 JASPAR yes 14026693 1611 118234165
chr1 14029021 14029705 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 14026693 2328 107802138
chr1 14029082 14029098 E2F2 JASPAR yes 14026693 2389 118234166
chr1 14029094 14029109 LEF1 JASPAR yes 14026693 2401 118234167
chr1 14029095 14029109 TCF7L2 JASPAR yes 14026693 2402 118234168
chr1 14029108 14029112 YY1 TRANSFAC yes 14026693 2415 118234169
chr1 14029118 14029133 FOXA1 JASPAR yes 14026693 2425 118234170
chr1 14029119 14029131 FOXI1 JASPAR yes 14026693 2426 118234171
chr1 14029120 14029132 FOXC2 JASPAR yes 14026693 2427 118234172
chr1 14029121 14029129 FOXG1 JASPAR yes 14026693 2428 118234173
chr1 14029121 14029132 FOXB1 JASPAR yes 14026693 2428 118234174
chr1 14029121 14029132 FOXC1 JASPAR yes 14026693 2428 118234175
chr1 14029121 14029137 POU4F2 JASPAR yes 14026693 2428 118234176
chr1 14029121 14029137 POU4F3 JASPAR yes 14026693 2428 118234177
chr1 14029122 14029133 FOXA1 JASPAR yes 14026693 2429 118234178
chr1 14029122 14029137 FOXA1 JASPAR yes 14026693 2429 118234179
chr1 14029123 14029137 POU4F1 JASPAR yes 14026693 2430 118234180
chr1 14029124 14029136 FOXC2 JASPAR yes 14026693 2431 118234181
chr1 14029124 14029140 POU4F3 JASPAR yes 14026693 2431 118234182
chr1 14029125 14029136 FOXB1 JASPAR yes 14026693 2432 118234183
chr1 14029125 14029136 FOXC1 JASPAR yes 14026693 2432 118234184
chr1 14029126 14029130 YY1 TRANSFAC yes 14026693 2433 118234185
chr1 14029162 14029176 TCF7L2 JASPAR yes 14026693 2469 118234186
chr1 14029176 14029188 GRHL1 JASPAR yes 14026693 2483 118234187
chr1 14029232 14029242 REL JASPAR yes 14026693 2539 118234188
chr1 14029244 14029259 FOXA1 JASPAR yes 14026693 2551 118234189
chr1 14029247 14029258 FOXB1 JASPAR yes 14026693 2554 118234190
chr1 14029247 14029258 FOXC1 JASPAR yes 14026693 2554 118234191
chr1 14029248 14029252 YY1 TRANSFAC yes 14026693 2555 118234192
chr1 14029253 14029266 POU2F2 JASPAR yes 14026693 2560 118234193
chr1 14029255 14029259 YY1 TRANSFAC yes 14026693 2562 118234194
chr1 14029274 14029289 LEF1 JASPAR yes 14026693 2581 118234195
chr1 14029275 14029289 TCF7L2 JASPAR yes 14026693 2582 118234196
chr1 14029283 14029298 MEF2A JASPAR yes 14026693 2590 118234197
chr1 14029284 14029299 MEF2C JASPAR yes 14026693 2591 118234198
chr1 14029285 14029297 MEF2A JASPAR yes 14026693 2592 118234199
chr1 14029285 14029297 MEF2B JASPAR yes 14026693 2592 118234200
chr1 14029285 14029297 MEF2D JASPAR yes 14026693 2592 118234201
chr1 14029286 14029296 MEF2A JASPAR yes 14026693 2593 118234202
chr1 14029287 14029291 YY1 TRANSFAC yes 14026693 2594 118234203
chr1 14029306 14029327 IRF1 JASPAR yes 14026693 2613 118234204
chr1 14029308 14029323 IRF9 JASPAR yes 14026693 2615 118234205
chr1 14029310 14029322 IRF1 JASPAR yes 14026693 2617 118234206
chr1 14029310 14029325 STAT2 JASPAR yes 14026693 2617 118234207
chr1 14029311 14029323 IRF1 JASPAR yes 14026693 2618 118234208
chr1 14029331 14029346 HSF1 JASPAR yes 14026693 2638 118234209
chr1 14029350 14029355 TFAP2A TRANSFAC yes 14026693 2657 118234210
chr1 14029350 14029356 MZF1 JASPAR yes 14026693 2657 118234211
chr1 14029350 14029371 ZNF263 JASPAR yes 14026693 2657 118234212
chr1 14029352 14029373 ZNF263 JASPAR yes 14026693 2659 118234213
chr1 14029355 14029376 ZNF263 JASPAR yes 14026693 2662 118234214
chr1 14029358 14029379 ZNF263 JASPAR yes 14026693 2665 118234215
chr1 14029361 14029382 ZNF263 JASPAR yes 14026693 2668 118234216
chr1 14029364 14029385 ZNF263 JASPAR yes 14026693 2671 118234217
chr1 14029366 14029386 RREB1 JASPAR yes 14026693 2673 118234218
chr1 14029367 14029388 ZNF263 JASPAR yes 14026693 2674 118234219
chr1 14029376 14029388 INSM1 JASPAR yes 14026693 2683 118234220
chr1 14029378 14029390 E2F8 JASPAR yes 14026693 2685 118234221
chr1 14029421 14029431 NFKB1 JASPAR yes 14026693 2728 118234222
chr1 14029421 14029431 RELA JASPAR yes 14026693 2728 118234223
chr1 14029421 14029431 REL JASPAR yes 14026693 2728 118234224
chr1 14029421 14029432 NFKB1 JASPAR yes 14026693 2728 118234225
chr1 14029421 14029436 HSF1 JASPAR yes 14026693 2728 118234226
chr1 14029426 14029439 ZBTB18 JASPAR yes 14026693 2733 118234227
chr1 14029439 14029452 NFKB1 JASPAR yes 14026693 2746 118234228
chr1 14029439 14029452 NFKB2 JASPAR yes 14026693 2746 118234229
chr1 14029445 14029455 SREBF1 JASPAR yes 14026693 2752 118234230
chr1 14029445 14029455 SREBF2 JASPAR yes 14026693 2752 118234231
chr1 14029445 14029455 TFEB JASPAR yes 14026693 2752 118234232
chr1 14029447 14029452 USF2 TRANSFAC yes 14026693 2754 118234233
chr1 14029454 14029458 NFE TRANSFAC yes 14026693 2761 118234234
chr1 14029459 14029474 RUNX2 JASPAR yes 14026693 2766 118234235
chr1 14029460 14029471 RUNX1 JASPAR yes 14026693 2767 118234236
chr1 14029470 14029473 MYB TRANSFAC yes 14026693 2777 118234237
chr1 14029476 14029481 SP1 TRANSFAC yes 14026693 2783 118234238
chr1 14029494 14029504 TBX21 JASPAR yes 14026693 2801 118234239
chr1 14029500 14029506 SOX10 JASPAR yes 14026693 2807 118234240
chr1 14029524 14029532 MEIS2 JASPAR yes 14026693 2831 118234241
chr1 14029524 14029532 MEIS3 JASPAR yes 14026693 2831 118234242
chr1 14029525 14029529 NFE TRANSFAC yes 14026693 2832 118234243
chr1 14029544 14029548 YY1 TRANSFAC yes 14026693 2851 118234244
chr1 14029563 14029575 ZBTB7C JASPAR yes 14026693 2870 118234245
chr1 14029569 14029573 H4TF2 TRANSFAC yes 14026693 2876 118234246
chr1 14029573 14029588 PRDM1 JASPAR yes 14026693 2880 118234247
chr1 14029589 14029604 SCRT1 JASPAR yes 14026693 2896 118234248
chr1 14029609 14029620 CDX2 JASPAR yes 14026693 2916 118234249
chr1 14029610 14029621 HOXA10 JASPAR yes 14026693 2917 118234250
chr1 14029611 14029620 CDX1 JASPAR yes 14026693 2918 118234251
chr1 14029611 14029621 HOXA13 JASPAR yes 14026693 2918 118234252
chr1 14029611 14029621 HOXB13 JASPAR yes 14026693 2918 118234253
chr1 14029611 14029621 HOXD13 JASPAR yes 14026693 2918 118234254
chr1 14029613 14029617 TEAD2 TRANSFAC yes 14026693 2920 118234255
chr1 14029613 14029618 TBP TRANSFAC yes 14026693 2920 118234256
chr1 14029613 14029619 TFIID TRANSFAC yes 14026693 2920 118234257
chr1 14029646 14029657 FOXH1 JASPAR yes 14026693 2953 118234258
chr1 14029655 14029659 YY1 TRANSFAC yes 14026693 2962 118234259
chr1 14029657 14029672 FOXP1 JASPAR yes 14026693 2964 118234260
chr1 14029659 14029674 IRF9 JASPAR yes 14026693 2966 118234261
chr1 14029661 14029669 FOXO3 JASPAR yes 14026693 2968 118234262
chr1 14029662 14029671 SRY JASPAR yes 14026693 2969 118234263
chr1 14029669 14029676 NKX3-1 JASPAR yes 14026693 2976 118234264
chr1 14029670 14029678 FOXC1 JASPAR yes 14026693 2977 118234265
chr1 14029681 14029685 YY1 TRANSFAC yes 14026693 2988 118234266
chr1 14029699 14029714 NR2C2 JASPAR yes 14026693 3006 118234267
chr1 14029713 14029733 TBX19 JASPAR yes 14026693 3020 118234268
chr1 14029715 14029731 T JASPAR yes 14026693 3022 118234269
chr1 14029718 14029722 YY1 TRANSFAC yes 14026693 3025 118234270
chr1 14029752 14029768 SOX8 JASPAR yes 14026693 3059 118234271
chr1 14029786 14029790 NFE TRANSFAC yes 14026693 3093 118234272
chr1 14029793 14029797 NFE TRANSFAC yes 14026693 3100 118234273
chr1 14029826 14029839 SMAD2 JASPAR yes 14026693 3133 118234274
chr1 14029828 14029836 MEIS2 JASPAR yes 14026693 3135 118234275
chr1 14029828 14029836 MEIS3 JASPAR yes 14026693 3135 118234276
chr1 14029841 14029861 TP53 JASPAR yes 14026693 3148 118234277
chr1 14029844 14029859 HSF1 JASPAR yes 14026693 3151 118234278
chr1 14029852 14029856 YY1 TRANSFAC yes 14026693 3159 118234279
chr1 14029863 14029873 NKX2-3 JASPAR yes 14026693 3170 118234280
chr1 14029864 14029873 NKX2-8 JASPAR yes 14026693 3171 118234281
SNPs associated with PRDM2[ENSG00000116731.18], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 14442381 rs10928018 A G 290807 Esophagus 0.381654 93486
chr1 13946479 rs1767675 C T 80214 Esophagus 0.000709027 89623
chr1 14530588 rs188076605 G A 379014 Esophagus 0.223571 94180
chr1 13996078 rs2495042 A G 30615 Heart 0.336784 90249
chr1 14877919 rs114040514 C T 726345 Ovary 0.174865 97036
chr1 14793531 rs150599944 T C 641957 Thyroid 0.246813 96307
chr1 14515925 rs6679368 A G 364351 Liver 0.392129 94066
chr1 13828957 rs12046672 G A 197736 Adrenal 0.203756 88800
Details of PRDM2[ENSG00000116731.18]
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Genomic Location chr1:14026693-14151574[+]
TSS 14026693
Gene Name PRDM2
Ensembl ID ENSG00000116731.18
ENTREZID 7799
Uniprot
Q13029
Protein Name
isoform CRA_a
isoform CRA_b
with ZNF domain
with ZNF domain
PR domain containing 2
PR domain containing 2
PR domain zinc finger protein 2
Expression levels of PRDM2[ENSG00000116731.18]
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