EnhancerDB
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Enhancers that regulate NEK2[ENSG00000117650.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 211753366 211753524 vista4967 211848960 95436
VISTA
chr1 211754949 211755173 vista4968 211848960 93787
VISTA
chr1 211760169 211767916 enh27466 211848960 81044
Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
chr1 211765642 211765767 vista4969 211848960 83193
VISTA
chr1 211772625 211795095 enh907 211848960 53865
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 211780151 211780642 vista4970 211848960 68318
VISTA
chr1 211786767 211786829 vista4971 211848960 62131
VISTA
chr1 211798651 211830775 enh12635 211848960 18185
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Heart
chr1 211823764 211823781 vista4972 211848960 25179
VISTA
chr1 211837893 211837920 vista4973 211848960 11040
VISTA
chr1 211841432 211841643 vista4974 211848960 7317
VISTA
chr1 211866545 211874414 enh60207 211848960 17585
Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Pancreas Blood (T-cell)
chr1 211875133 211881851 enh43136 211848960 26173
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr1 211893985 211900355 enh87681 211848960 45025
Pancreas Bone Marrow (K562)
chr1 211903585 211916175 enh908 211848960 54625
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Breast Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
chr1 211912030 211912428 vista4975 211848960 63070
VISTA
chr1 211924965 211932195 enh50171 211848960 76005
Thyroid Large Intestine
chr1 211925784 211926070 vista4976 211848960 76824
VISTA
chr1 211935885 211940315 enh101161 211848960 86925
Thyroid
Transcript facotrs that regulate NEK2[ENSG00000117650.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with NEK2[ENSG00000117650.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 211755754 rs146177296 G A 80360 Esophagus 0.0446164 917241
chr1 211869063 rs6674362 G A 20103 Esophagus 0.113642 918349
chr1 211258210 rs74156892 G A 577904 Heart 0.0485256 914435
chr1 210929722 rs74156066 A T 906392 Breast 0.0556096 913835
chr1 211904589 rs115909305 T C 55629 Spleen 0.000698212 918622
chr1 211553612 rs6684161 T C 282502 Ovary 0.179713 915668
chr1 211730121 rs74750613 G A 105993 Uterus 0.302521 917002
chr1 212660322 rs79919770 A T 811362 Thyroid 0.0697293 923330
chr1 212461037 rs185873389 C T 612077 Liver 0.26425 922261
chr1 212384598 rs4369290 G A 535638 Lung 0.00970569 921402
chr1 211777634 rs57533047 T A 58480 Adrenal 0.000249952 917432
Details of NEK2[ENSG00000117650.8]
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Genomic Location chr1:211836114-211848960[-]
TSS 211848960
Gene Name NEK2
Ensembl ID ENSG00000117650.8
ENTREZID 4751
Uniprot
P51955
F6U4U2
Protein Name
Serine/threonine-protein kinase Nek2
Expression levels of NEK2[ENSG00000117650.8]
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