EnhancerDB
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Enhancers that regulate TMEM39B[ENSG00000121775.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 32439972 32455205 enh42926 32537632 82427
Skin (Keratinocyte) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Breast Spleen Muscle (Myotube) Uterus Thymus Stomach
chr1 32465359 32473836 enh60108 32537632 63796
Peripheral Blood (MM.1S) Neural Stem Cells (H9) Blood (OCI-LY7)
chr1 32482780 32491015 enh60109 32537632 46617
Bone Marrow (K562) Colon (HCT116) Blood (OCI-LY7)
chr1 32510030 32510913 vista22 32537632 26719
VISTA
chr1 32513625 32517775 enh206 32537632 19857
Blood (Karpas-422)
chr1 32519121 32523315 enh42927 32537632 14317
Muscle (A673) Muscle (Myotube)
chr1 32525225 32531340 enh11724 32537632 6292
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Thymus Stomach
chr1 32574975 32601599 enh207 32537632 37343
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 32602345 32608115 enh26613 32537632 64713
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Astrocyte Stomach Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
chr1 32613525 32619315 enh26614 32537632 75893
Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Uterus
Transcript facotrs that regulate TMEM39B[ENSG00000121775.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with TMEM39B[ENSG00000121775.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 33184407 rs190897473 G C 615940 Esophagus 0.175857 219540
chr1 31569772 rs12061390 C T 967860 Heart 0.0446322 208966
chr1 32444038 rs186808175 G A 93594 Heart 0.00221671 216271
chr1 33235626 rs3737995 G A,C 667159 Pancreas 0.145937 220003
chr1 32538835 rs113025185 GGGACATT G 0 Thyroid 0.00815612 216800
chr1 32353966 rs147523592 G A 183666 Lung 0.135399 215474
chr1 32723667 rs12025920 T C 155200 Stomach 0.0331847 217561
chr1 32424341 rs112205929 T C 113291 Adrenal 0.204637 216128
Details of TMEM39B[ENSG00000121775.13]
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Genomic Location chr1:32537632-32568467[+]
TSS 32537632
Gene Name TMEM39B
Ensembl ID ENSG00000121775.13
ENTREZID 55116
Uniprot
Q9NW51
Q9GZU3
Q9BT39
B3KRL9
Protein Name
isoform CRA_c
TMEM39B protein
Transmembrane protein 39B
Transmembrane protein 39B
Expression levels of TMEM39B[ENSG00000121775.13]
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