EnhancerDB
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Enhancers that regulate CLCC1[ENSG00000121940.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 109401265 109412615 enh12122 109506111 93496
Placenta Large Intestine Lung (PC-9)
chr1 109429629 109434595 enh49931 109506111 71516
Esophagus Uterus Large Intestine
chr1 109467804 109468470 vista2835 109506111 37641
VISTA
chr1 109469350 109469540 vista2836 109506111 36571
VISTA
chr1 109494125 109501595 enh95891 109506111 4516
Blood (T-cell) Epithelial (MCF-7)
chr1 109499781 109500180 vista2837 109506111 5931
VISTA
chr1 109515208 109515609 vista2838 109506111 9097
VISTA
chr1 109517465 109521615 enh109341 109506111 11354
Stomach
chr1 109572587 109572654 vista2839 109506111 66476
VISTA
chr1 109590812 109595374 enh58137 109506111 84701
Esophagus Skin (Keratinocyte) Prostate (RWPE1) Epithelial (MCF-7)
Transcript facotrs that regulate CLCC1[ENSG00000121940.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 109499475 109501153 ZNF274 GTRD no Cervix (HeLa-S3) 109506111 4958 107818915
chr1 109499560 109501401 ZNF143 GTRD no Epithelial (MCF-7) 109506111 4710 21326738
chr1 109499560 109501401 ZNF143 GTRD no Epithelial (MCF-7) 109506111 4710 107818925
chr1 109499619 109501143 ZNF143 GTRD no Epithelial (MCF-7) 109506111 4968 21326744
chr1 109499619 109501143 ZNF143 GTRD no Epithelial (MCF-7) 109506111 4968 107818936
chr1 109501131 109501134 MYB TRANSFAC yes 109506111 4977 31407202
chr1 109501164 109501175 CDX2 JASPAR yes 109506111 4936 31407203
chr1 109501166 109501175 CDX1 JASPAR yes 109506111 4936 31407204
chr1 109501178 109501183 ETS2 TRANSFAC yes 109506111 4928 31407205
chr1 109501186 109501207 IRF1 JASPAR yes 109506111 4904 31407206
chr1 109501188 109501203 IRF9 JASPAR yes 109506111 4908 31407207
chr1 109501189 109501203 IRF7 JASPAR yes 109506111 4908 31407208
chr1 109501189 109501203 IRF8 JASPAR yes 109506111 4908 31407209
chr1 109501190 109501204 STAT1 JASPAR yes 109506111 4907 31407210
chr1 109501190 109501205 PRDM1 JASPAR yes 109506111 4906 31407211
chr1 109501190 109501205 STAT2 JASPAR yes 109506111 4906 31407212
chr1 109501191 109501203 IRF1 JASPAR yes 109506111 4908 31407213
chr1 109501222 109501232 SP1 JASPAR yes 109506111 4879 31407214
chr1 109501228 109501239 FOSL2 JASPAR yes 109506111 4872 31407215
chr1 109501229 109501240 NFE2 JASPAR yes 109506111 4871 31407216
chr1 109501244 109501265 LUN1 TRANSFAC yes 109506111 4846 31407217
chr1 109501271 109501276 SP1 TRANSFAC yes 109506111 4835 31407218
chr1 109501312 109501324 YY1 JASPAR yes 109506111 4787 31407219
chr1 109501314 109501325 YY2 JASPAR yes 109506111 4786 31407220
chr1 109501315 109501327 HLF JASPAR yes 109506111 4784 31407221
chr1 109501333 109501348 MEF2C JASPAR yes 109506111 4763 31407222
chr1 109501334 109501349 MEF2A JASPAR yes 109506111 4762 31407223
chr1 109501335 109501347 MEF2A JASPAR yes 109506111 4764 31407224
chr1 109501335 109501347 MEF2B JASPAR yes 109506111 4764 31407225
chr1 109501335 109501347 MEF2D JASPAR yes 109506111 4764 31407226
chr1 109501348 109501367 PAX5 JASPAR yes 109506111 4744 31407227
chr1 109501370 109501385 SCRT1 JASPAR yes 109506111 4726 31407228
chr1 109501371 109501381 FIGLA JASPAR yes 109506111 4730 31407229
chr1 109501371 109501381 ID4 JASPAR yes 109506111 4730 31407230
chr1 109501371 109501381 TCF3 JASPAR yes 109506111 4730 31407231
chr1 109501371 109501381 TCF4 JASPAR yes 109506111 4730 31407232
chr1 109501372 109501381 SNAI2 JASPAR yes 109506111 4730 31407233
chr1 109501373 109501378 USF2 TRANSFAC yes 109506111 4733 31407234
chr1 109501377 109501393 RFX4 JASPAR yes 109506111 4718 31407235
chr1 109501427 109501437 SP1 JASPAR yes 109506111 4674 31407236
chr1 109501427 109501448 ZNF263 JASPAR yes 109506111 4663 31407237
chr1 109501429 109501434 SP1 TRANSFAC yes 109506111 4677 31407238
chr1 109501429 109501441 HINFP JASPAR yes 109506111 4670 31407239
chr1 109501452 109501463 CEBPB JASPAR yes 109506111 4648 31407240
chr1 109501469 109501488 RFX2 JASPAR yes 109506111 4623 31407241
chr1 109501474 109501493 PAX5 JASPAR yes 109506111 4618 31407242
chr1 109501499 109501511 MEF2D JASPAR yes 109506111 4600 31407243
chr1 109501501 109501515 ONECUT3 JASPAR yes 109506111 4596 31407244
chr1 109501502 109501517 FOXA1 JASPAR yes 109506111 4594 31407245
chr1 109501504 109501516 FOXI1 JASPAR yes 109506111 4595 31407246
chr1 109501505 109501519 RORA JASPAR yes 109506111 4592 31407247
chr1 109501522 109501533 FOSL2 JASPAR yes 109506111 4578 31407248
chr1 109501536 109501540 TEAD2 TRANSFAC yes 109506111 4571 31407249
chr1 109501537 109501545 RHOXF1 JASPAR yes 109506111 4566 31407250
chr1 109501538 109501559 LUN1 TRANSFAC yes 109506111 4552 31407251
chr1 109501555 109501569 PLAG1 JASPAR yes 109506111 4542 31407252
chr1 109501561 109501573 ZBTB7A JASPAR yes 109506111 4538 31407253
chr1 109501563 109501568 SP1 TRANSFAC yes 109506111 4543 31407254
chr1 109501566 109501571 SP1 TRANSFAC yes 109506111 4540 31407255
SNPs associated with CLCC1[ENSG00000121940.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 109406103 rs11587134 C T 66027 Esophagus 0.00538987 543935
chr1 108694377 rs78696806 C T 777753 Esophagus 0.29484 541823
chr1 109405956 rs11585643 G T 66174 Ovary 0.128693 543933
chr1 108888029 rs80342606 C T 584101 Uterus 0.321984 542172
Details of CLCC1[ENSG00000121940.11]
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Genomic Location chr1:109472130-109506111[-]
TSS 109506111
Gene Name CLCC1
Ensembl ID ENSG00000121940.11
ENTREZID 23155
Uniprot
A0A024R095
Q96S66
A0A024R0G0
Protein Name
isoform CRA_a
isoform CRA_b
Chloride channel CLIC-like 1
Chloride channel CLIC-like 1
Chloride channel CLIC-like protein 1
Expression levels of CLCC1[ENSG00000121940.11]
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