EnhancerDB
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Enhancers that regulate C12orf44[ENSG00000123395.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 52362566 52373215 enh14724 52463030 89815
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 52364914 52365223 vista13428 52463030 97807
VISTA
chr12 52366669 52367046 vista13429 52463030 95984
VISTA
chr12 52395945 52402675 enh98965 52463030 60355
Uterus
chr12 52399570 52399970 vista13430 52463030 63060
VISTA
chr12 52415565 52430755 enh2354 52463030 32275
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr12 52418719 52418897 vista13431 52463030 44133
VISTA
chr12 52419301 52419935 vista13432 52463030 43095
VISTA
chr12 52423514 52423824 vista13433 52463030 39206
VISTA
chr12 52426305 52426422 vista13434 52463030 36608
VISTA
chr12 52426547 52427164 vista13435 52463030 35866
VISTA
chr12 52433623 52433924 vista13436 52463030 29106
VISTA
chr12 52438176 52438423 vista13437 52463030 24607
VISTA
chr12 52438699 52439014 vista13438 52463030 24016
VISTA
chr12 52439738 52439919 vista13439 52463030 23111
VISTA
chr12 52450065 52457795 enh86109 52463030 5235
Colon (HCT116) Cervix (HeLa-S3) Liver (HepG2) Stomach
chr12 52457778 52458372 vista13440 52463030 4658
VISTA
chr12 52473285 52477500 enh47582 52463030 10255
Thymus Heart
chr12 52479825 52489375 enh2355 52463030 16795
Blood (OCI-LY7) Pancreas Blood (Karpas-422) Stomach
chr12 52508085 52522855 enh2356 52463030 45055
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
chr12 52512288 52512603 vista13441 52463030 49258
VISTA
chr12 52524729 52528879 enh62269 52463030 61699
Esophagus
chr12 52525424 52525587 vista13442 52463030 62394
VISTA
chr12 52531174 52553795 enh2357 52463030 68144
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr12 52539319 52539712 vista13443 52463030 76289
VISTA
chr12 52540237 52540565 vista13444 52463030 77207
VISTA
chr12 52540964 52541526 vista13445 52463030 77934
VISTA
chr12 52542210 52542726 vista13446 52463030 79180
VISTA
chr12 52543416 52543547 vista13447 52463030 80386
VISTA
chr12 52545730 52546132 vista13448 52463030 82700
VISTA
chr12 52554925 52561655 enh14725 52463030 91895
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 52557711 52558022 vista13449 52463030 94681
VISTA
chr12 52559335 52559488 vista13450 52463030 96305
VISTA
Transcript facotrs that regulate C12orf44[ENSG00000123395.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 52457735 52458311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4719 21546102
chr12 52457735 52458311 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4719 108033030
chr12 52457744 52458248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4782 21546103
chr12 52457744 52458248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4782 108033031
chr12 52457794 52458258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4772 21546104
chr12 52457794 52458258 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4772 108033032
chr12 52457856 52458312 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4718 108033033
chr12 52457872 52458248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4782 108033034
chr12 52457884 52458280 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4750 108033035
chr12 52457890 52458274 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4756 108033036
chr12 52457894 52458140 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4890 108033037
chr12 52457894 52458264 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4766 108033038
chr12 52457913 52458253 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4777 108033039
chr12 52457914 52458244 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4786 108033040
chr12 52457919 52458249 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4781 108033041
chr12 52457926 52458246 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4784 108033042
chr12 52457932 52458236 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4794 108033043
chr12 52457954 52458234 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 52463030 4796 108033044
chr12 52457963 52458219 CEBPB UCSC Txn Factor no Conserved 52463030 4811 108033045
chr12 52457973 52458203 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 52463030 4827 108033046
chr12 52457983 52458227 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 52463030 4803 108033047
chr12 52458010 52458200 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4830 108033048
chr12 52458010 52458270 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 52463030 4760 108033049
chr12 52458024 52458034 RELA JASPAR yes 52463030 4996 82405412
chr12 52458037 52458052 RFX5 JASPAR yes 52463030 4978 82405413
chr12 52458060 52458070 SREBF2 JASPAR yes 52463030 4960 82405414
chr12 52458063 52458077 ATF7 JASPAR yes 52463030 4953 82405415
chr12 52458064 52458076 JDP2 JASPAR yes 52463030 4954 82405416
chr12 52458066 52458071 ATF1 TRANSFAC yes 52463030 4959 82405417
chr12 52458066 52458074 CREB1 JASPAR yes 52463030 4956 82405418
chr12 52458068 52458073 ATF1 TRANSFAC yes 52463030 4957 82405419
chr12 52458086 52458101 RFX5 JASPAR yes 52463030 4929 82405420
chr12 52458099 52458110 FOSL1 JASPAR yes 52463030 4920 82405421
chr12 52458100 52458111 JUNB JASPAR yes 52463030 4919 82405422
chr12 52458100 52458114 JUN JASPAR yes 52463030 4916 82405423
chr12 52458112 52458126 ATF7 JASPAR yes 52463030 4904 82405424
chr12 52458115 52458123 CREB1 JASPAR yes 52463030 4907 82405425
chr12 52458127 52458131 ESR1 TRANSFAC yes 52463030 4899 82405426
chr12 52458138 52458150 NHLH1 JASPAR yes 52463030 4880 82405427
chr12 52458139 52458149 NHLH1 JASPAR yes 52463030 4881 82405428
chr12 52458160 52458164 LFA1 TRANSFAC yes 52463030 4866 82405429
chr12 52458181 52458192 EBF1 JASPAR yes 52463030 4838 82405430
chr12 52458188 52458192 LFA1 TRANSFAC yes 52463030 4838 82405431
chr12 52458209 52458214 SP1 TRANSFAC yes 52463030 4816 82405432
chr12 52458214 52458218 YY1 TRANSFAC yes 52463030 4812 82405433
chr12 52458219 52458237 ESR1 JASPAR yes 52463030 4793 82405434
chr12 52458284 52458290 MZF1 JASPAR yes 52463030 4740 82405435
chr12 52458335 52458339 NFE TRANSFAC yes 52463030 4691 82405436
chr12 52458343 52458349 NFIC JASPAR yes 52463030 4681 82405437
chr12 52458343 52458356 ZBTB18 JASPAR yes 52463030 4674 82405438
chr12 52458344 52458356 NHLH1 JASPAR yes 52463030 4674 82405439
chr12 52458344 52458356 PKNOX1 JASPAR yes 52463030 4674 82405440
chr12 52458344 52458356 PKNOX2 JASPAR yes 52463030 4674 82405441
chr12 52458345 52458355 NHLH1 JASPAR yes 52463030 4675 82405442
chr12 52458346 52458359 SCRT2 JASPAR yes 52463030 4671 82405443
SNPs associated with C12orf44[ENSG00000123395.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 51582188 rs10747605 T C 880842 Esophagus 0.274489 2630220
chr12 52600202 rs114126973 G C 128924 Esophagus 0.0326396 2636805
chr12 52338337 rs73301666 G A 124693 Esophagus 0.248458 2634324
chr12 53357956 rs73112455 T C 886678 Heart 0.213641 2643647
chr12 53222569 rs73106407 G A 751291 Pancreas 0.0746554 2642122
chr12 52534794 rs146304560 G C 63516 Breast 0.802806 2635868
chr12 52534794 rs146304560 G C 63516 Liver 0.439373 2635868
chr12 52441550 rs744691 C A 21480 Lung 0.270614 2634888
chr12 52274514 rs2684336 G A 188516 Stomach 0.0496329 2633589
chr12 52560065 rs4271428 G A 88787 Adrenal 0.14214 2636276
Details of C12orf44[ENSG00000123395.10]
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Genomic Location chr12:52463030-52471278[+]
TSS 52463030
Gene Name C12orf44
Ensembl ID ENSG00000123395.10
ENTREZID
Uniprot
Protein Name
isoform CRA_a
Autophagy-related protein 101
Chromosome 12 open reading frame 44
Expression levels of C12orf44[ENSG00000123395.10]
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