EnhancerDB
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Enhancers that regulate RRP36[ENSG00000124541.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 42898508 42898648 vista51997 42989383 90735
VISTA
chr6 42940985 42945135 enh9130 42989383 44248
Blood (Karpas-422)
chr6 42944082 42944413 vista51998 42989383 44970
VISTA
chr6 42944777 42944970 vista51999 42989383 44413
VISTA
chr6 42962325 42969267 enh46127 42989383 20116
Muscle (Myotube) Large Intestine
chr6 42982951 42983183 vista52000 42989383 6200
VISTA
chr6 43001164 43001472 vista52001 42989383 11781
VISTA
chr6 43045645 43067063 enh23249 42989383 56262
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 43058034 43058580 vista52002 42989383 68651
VISTA
chr6 43067345 43073536 enh90381 42989383 77962
Spleen Prostate (RWPE1)
chr6 43073020 43073202 vista52003 42989383 83637
VISTA
chr6 43079195 43086442 enh23250 42989383 89812
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Thymus Stomach
chr6 43084087 43084410 vista52004 42989383 94704
VISTA
chr6 43085846 43085863 vista52005 42989383 96463
VISTA
chr6 43086525 43096385 enh23251 42989383 97142
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript facotrs that regulate RRP36[ENSG00000124541.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RRP36[ENSG00000124541.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 42989433 rs202053592 CCGGGGCCCGACGTCCCCG C 0 Esophagus 0.000629013 9035580
chr6 43775494 rs61448493 G A 773600 Heart 0.140657 9038937
chr6 42753778 rs58762622 AAC A 235605 Pancreas 0.183368 9034676
chr6 42226857 rs731775 T C 762526 Uterus 0.23701 9031171
chr6 43296117 rs142656572 T C 294223 Lung 0.00700352 9036686
chr6 42941054 rs376101371 CTCT C 48329 Adrenal 0.0112898 9035344
Details of RRP36[ENSG00000124541.6]
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Genomic Location chr6:42989383-43001894[+]
TSS 42989383
Gene Name RRP36
Ensembl ID ENSG00000124541.6
ENTREZID 88745
Uniprot
Q96EU6
Protein Name
Ribosomal RNA processing protein 36 homolog
Ribosomal RNA-processing protein 36 homolog
Expression levels of RRP36[ENSG00000124541.6]
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