EnhancerDB
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Enhancers that regulate RTN2[ENSG00000125744.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 45905744 45905944 vista29593 46000319 94375
VISTA
chr19 45906934 45907335 vista29594 46000319 92984
VISTA
chr19 45920845 45924995 enh5169 46000319 75324
Blood (Karpas-422)
chr19 45925514 45929982 enh102611 46000319 70337
Bone (Osteoblast)
chr19 45931993 45932316 vista29595 46000319 68003
VISTA
chr19 45940563 45951807 enh5170 46000319 48512
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus
chr19 45943163 45943490 vista29596 46000319 56829
VISTA
chr19 45944272 45944469 vista29597 46000319 55850
VISTA
chr19 45945937 45946679 vista29598 46000319 53640
VISTA
chr19 45946690 45947113 vista29599 46000319 53206
VISTA
chr19 45952039 45952594 vista29600 46000319 47725
VISTA
chr19 45953045 45961795 enh18105 46000319 38524
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myotube) Liver (HepG2) Heart
chr19 45953262 45953678 vista29601 46000319 46641
VISTA
chr19 45953764 45954783 vista29602 46000319 45536
VISTA
chr19 45954905 45955186 vista29603 46000319 45133
VISTA
chr19 45959420 45959846 vista29604 46000319 40473
VISTA
chr19 45968349 45968608 vista29605 46000319 31711
VISTA
chr19 45980345 45980732 vista29606 46000319 19587
VISTA
chr19 45987073 45987327 vista29607 46000319 12992
VISTA
chr19 45995542 45995743 vista29608 46000319 4576
VISTA
chr19 45999277 45999601 vista29609 46000319 718
VISTA
chr19 46011701 46012269 vista29610 46000319 11382
VISTA
chr19 46012498 46012899 vista29611 46000319 12179
VISTA
chr19 46013645 46020716 enh5171 46000319 13326
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Bone (Osteoblast) Lung (A549) Placenta Blood (Karpas-422) Lung (PC-9) Blood (T-cell)
chr19 46014236 46014617 vista29612 46000319 13917
VISTA
chr19 46018095 46018753 vista29613 46000319 17776
VISTA
chr19 46022243 46026517 enh86326 46000319 21924
Colon (HCT116)
chr19 46036145 46041255 enh108728 46000319 35826
Lung (PC-9)
chr19 46043565 46049535 enh5172 46000319 43246
Prostate (PC-3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (Karpas-422)
chr19 46058172 46075575 enh5173 46000319 57853
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr19 46076605 46087095 enh18106 46000319 76286
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Muscle (Myotube) Heart
chr19 46097185 46102315 enh109839 46000319 96866
Stomach
Transcript facotrs that regulate RTN2[ENSG00000125744.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 45994263 45996342 ZBTB33 GTRD no Lung (A549) 46000319 3977 108416779
chr19 45994304 45996445 ZBTB33 GTRD no Lung (A549) 46000319 3874 108416780
chr19 45994310 45995638 ZBTB33 GTRD no Lung (A549) 46000319 4681 108416781
chr19 45994311 45996549 ZNF274 GTRD no Bone Marrow (K562) 46000319 3770 108416782
chr19 45994317 45995901 ZNF274 GTRD no Bone Marrow (K562) 46000319 4418 108416783
chr19 45994323 45996532 ZNF143 GTRD no Epithelial (MCF-7) 46000319 3787 108416784
chr19 45994334 45996526 ZNF274 GTRD no Blood (GM12878) 46000319 3793 108416785
chr19 45994338 45996322 ZBTB33 GTRD no Lung (A549) 46000319 3997 108416786
chr19 45994346 45996539 ZBTB33 GTRD no Lung (A549) 46000319 3780 108416787
chr19 45994347 45996561 ZBTB33 GTRD no Lung (A549) 46000319 3758 108416788
chr19 45994365 45996454 ZBTB33 GTRD no Lung (A549) 46000319 3865 108416789
chr19 45994386 45996331 ZBTB33 GTRD no Lung (A549) 46000319 3988 108416790
chr19 45994388 45995568 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4751 108416791
chr19 45994403 45996339 ZBTB33 GTRD no Lung (A549) 46000319 3980 108416792
chr19 45994411 45996075 ZBTB33 GTRD no Lung (A549) 46000319 4244 108416793
chr19 45994428 45996544 ZNF274 GTRD no Bone Marrow (K562) 46000319 3775 108416794
chr19 45994441 45996711 ZNF274 GTRD no Bone Marrow (K562) 46000319 3608 108416795
chr19 45994442 45996003 ZNF274 GTRD no Liver (HepG2) 46000319 4316 108416796
chr19 45994449 45996325 ZNF274 GTRD no Blood (GM12878) 46000319 3994 108416797
chr19 45994451 45996707 ZNF274 GTRD no Bone Marrow (K562) 46000319 3612 108416798
chr19 45994471 45996535 ZNF274 GTRD no Bone Marrow (K562) 46000319 3784 108416799
chr19 45994473 45996440 ZNF274 GTRD no Liver (HepG2) 46000319 3879 108416800
chr19 45994474 45995840 ZNF274 GTRD no Bone Marrow (K562) 46000319 4479 108416801
chr19 45994474 45996440 ZBTB33 GTRD no Lung (A549) 46000319 3879 108416802
chr19 45994496 45996600 ZBTB33 GTRD no Lung (A549) 46000319 3719 108416803
chr19 45994498 45996244 ZNF274 GTRD no Blood (GM12878) 46000319 4075 108416804
chr19 45994528 45996379 ZNF274 GTRD no Bone Marrow (K562) 46000319 3940 108416805
chr19 45994535 45995903 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4416 108416806
chr19 45994550 45996251 STAT3 GTRD no Blood (OCI-LY7) 46000319 4068 108416807
chr19 45994550 45996302 ZNF274 GTRD no Blood (GM12878) 46000319 4017 108416808
chr19 45994554 45996182 ZNF274 GTRD no Blood (GM12878) 46000319 4137 108416809
chr19 45994556 45996097 ZBTB33 GTRD no Lung (A549) 46000319 4222 108416810
chr19 45994561 45996026 ZNF274 GTRD no Blood (GM12878) 46000319 4293 108416811
chr19 45994565 45995677 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4642 108416812
chr19 45994567 45996258 ZNF274 GTRD no Blood (GM12878) 46000319 4061 108416813
chr19 45994574 45996136 ZNF274 GTRD no Liver (HepG2) 46000319 4183 108416814
chr19 45994578 45995583 ZNF274 GTRD no Bone Marrow (K562) 46000319 4736 108416815
chr19 45994583 45995979 ZNF274 GTRD no Bone Marrow (K562) 46000319 4340 108416816
chr19 45994594 45996013 ZBTB33 GTRD no Lung (A549) 46000319 4306 108416817
chr19 45994620 45995958 ZNF274 GTRD no Liver (HepG2) 46000319 4361 108416818
chr19 45994623 45995907 ZBTB33 GTRD no Lung (A549) 46000319 4412 108416819
chr19 45994625 45996073 ZBTB33 GTRD no Lung (A549) 46000319 4246 108416820
chr19 45994626 45996399 ZBTB33 GTRD no Lung (A549) 46000319 3920 108416821
chr19 45994633 45995673 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4646 108416822
chr19 45994653 45995818 ZNF274 GTRD no Bone Marrow (K562) 46000319 4501 108416823
chr19 45994657 45995910 ZNF274 GTRD no Blood (GM12878) 46000319 4409 108416824
chr19 45994661 45995717 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4602 108416825
chr19 45994661 45996137 TCF7L2 GTRD no Colon (HCT116) 46000319 4182 108416826
chr19 45994676 45995876 ZNF274 GTRD no Liver (HepG2) 46000319 4443 108416827
chr19 45994677 45995962 ZBTB33 GTRD no Lung (A549) 46000319 4357 108416828
chr19 45994680 45996473 ZNF274 GTRD no Bone Marrow (K562) 46000319 3846 108416829
chr19 45994695 45995949 ZBTB33 GTRD no Lung (A549) 46000319 4370 108416830
chr19 45994696 45996303 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4016 108416831
chr19 45994697 45995841 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4478 108416832
chr19 45994699 45995850 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4469 108416833
chr19 45994702 45995958 ZNF274 GTRD no Bone Marrow (K562) 46000319 4361 108416834
chr19 45994702 45996081 ZNF274 GTRD no Liver (HepG2) 46000319 4238 108416835
chr19 45994703 45996435 ZNF274 GTRD no Bone Marrow (K562) 46000319 3884 108416836
chr19 45994705 45995882 ZNF274 GTRD no Blood (GM12878) 46000319 4437 108416837
chr19 45994705 45995935 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4384 108416838
chr19 45994707 45996093 ZNF274 GTRD no Liver (HepG2) 46000319 4226 108416839
chr19 45994710 45996450 ZNF274 GTRD no Bone Marrow (K562) 46000319 3869 108416840
chr19 45994711 45995741 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4578 108416841
chr19 45994711 45995827 ZBTB33 GTRD no Lung (A549) 46000319 4492 108416842
chr19 45994715 45995824 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4495 108416843
chr19 45994718 45996561 ZNF274 GTRD no Bone Marrow (K562) 46000319 3758 108416844
chr19 45994719 45995862 ZNF274 GTRD no Liver (HepG2) 46000319 4457 108416845
chr19 45994722 45995880 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4439 108416846
chr19 45994724 45995734 ZNF274 GTRD no Bone Marrow (K562) 46000319 4585 108416847
chr19 45994724 45996089 ZNF274 GTRD no Blood (GM12878) 46000319 4230 108416848
chr19 45994725 45995619 ZBTB33 GTRD no Lung (A549) 46000319 4700 108416849
chr19 45994725 45995729 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4590 108416850
chr19 45994728 45995821 ZNF274 GTRD no Blood (GM12878) 46000319 4498 108416851
chr19 45994731 45996028 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4291 108416852
chr19 45994734 45995811 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4508 108416853
chr19 45994734 45995833 ZNF274 GTRD no Blood (GM12878) 46000319 4486 108416854
chr19 45994735 45995795 ZNF274 GTRD no Liver (HepG2) 46000319 4524 108416855
chr19 45994737 45995929 ZNF274 GTRD no Blood (GM12878) 46000319 4390 108416856
chr19 45994738 45995796 ZNF274 GTRD no Bone Marrow (K562) 46000319 4523 108416857
chr19 45994739 45995689 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4630 108416858
chr19 45994739 45995731 ZBTB33 GTRD no Lung (A549) 46000319 4588 108416859
chr19 45994740 45995730 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4589 108416860
chr19 45994740 45995864 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4455 108416861
chr19 45994742 45995791 ZNF274 GTRD no Bone Marrow (K562) 46000319 4528 108416862
chr19 45994742 45995928 ZNF274 GTRD no Liver (HepG2) 46000319 4391 108416863
chr19 45994744 45996488 ZNF274 GTRD no Bone Marrow (K562) 46000319 3831 108416864
chr19 45994746 45995704 ZNF274 GTRD no Blood (GM12878) 46000319 4615 108416865
chr19 45994746 45995887 ZNF274 GTRD no Liver (HepG2) 46000319 4432 108416866
chr19 45994746 45995950 ZNF274 GTRD no Bone Marrow (K562) 46000319 4369 108416867
chr19 45994747 45995983 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4336 108416868
chr19 45994750 45995807 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4512 108416869
chr19 45994750 45996080 ZNF274 GTRD no Blood (GM12878) 46000319 4239 108416870
chr19 45994759 45996380 ZNF274 GTRD no Liver (HepG2) 46000319 3939 108416871
chr19 45994762 45995658 ZNF274 GTRD no Bone Marrow (K562) 46000319 4661 108416872
chr19 45994765 45995882 ZNF274 GTRD no Liver (HepG2) 46000319 4437 108416873
chr19 45994770 45995989 ZNF274 GTRD no Blood (GM12878) 46000319 4330 108416874
chr19 45994775 45995976 ZNF274 GTRD no Blood (GM12878) 46000319 4343 108416875
chr19 45994776 45995849 ZNF274 GTRD no Blood (GM12878) 46000319 4470 108416876
chr19 45994777 45995902 ZNF274 GTRD no Bone Marrow (K562) 46000319 4417 108416877
chr19 45994778 45995900 ZNF274 GTRD no Blood (GM12878) 46000319 4419 108416878
chr19 45994779 45995983 ZNF274 GTRD no Liver (HepG2) 46000319 4336 108416879
chr19 45994782 45996509 ZNF274 GTRD no Bone Marrow (K562) 46000319 3810 108416880
chr19 45994783 45996322 ZNF143 GTRD no Epithelial (MCF-7) 46000319 3997 108416881
chr19 45994785 45995839 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4480 108416882
chr19 45994785 45995839 ZNF274 GTRD no Blood (GM12878) 46000319 4480 108416883
chr19 45994788 45995833 ZNF274 GTRD no Liver (HepG2) 46000319 4486 108416884
chr19 45994794 45995599 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4720 108416885
chr19 45994794 45996279 ZNF274 GTRD no Liver (HepG2) 46000319 4040 108416886
chr19 45994794 45996399 ZNF274 GTRD no Liver (HepG2) 46000319 3920 108416887
chr19 45994798 45995903 ZNF274 GTRD no Bone Marrow (K562) 46000319 4416 108416888
chr19 45994806 45995820 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4499 108416889
chr19 45994807 45995788 ZNF274 GTRD no Blood (GM12878) 46000319 4531 108416890
chr19 45994808 45995800 ZNF274 GTRD no Blood (GM12878) 46000319 4519 108416891
chr19 45994811 45995922 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4397 108416892
chr19 45994814 45995653 ZNF274 GTRD no Blood (GM12878) 46000319 4666 108416893
chr19 45994815 45995609 ZNF274 GTRD no Liver (HepG2) 46000319 4710 108416894
chr19 45994818 45995707 ZNF274 GTRD no Bone Marrow (K562) 46000319 4612 108416895
chr19 45994821 45995753 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4566 108416896
chr19 45994821 45996191 ZNF274 GTRD no Bone Marrow (K562) 46000319 4128 108416897
chr19 45994822 45995703 ZNF274 GTRD no Liver (HepG2) 46000319 4616 108416898
chr19 45994822 45995780 ZNF274 GTRD no Liver (HepG2) 46000319 4539 108416899
chr19 45994826 45995891 ZNF274 GTRD no Liver (HepG2) 46000319 4428 108416900
chr19 45994830 45995834 TCF7L2 GTRD no Colon (HCT116) 46000319 4485 108416901
chr19 45994835 45995731 ZBTB33 GTRD no Lung (A549) 46000319 4588 108416902
chr19 45994838 45995587 ZNF274 GTRD no Liver (HepG2) 46000319 4732 108416903
chr19 45994838 45995665 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4654 108416904
chr19 45994846 45995681 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4638 108416905
chr19 45994846 45995901 ZNF274 GTRD no Bone Marrow (K562) 46000319 4418 108416906
chr19 45994849 45995723 ZNF274 GTRD no Bone Marrow (K562) 46000319 4596 108416907
chr19 45994853 45995789 ZNF274 GTRD no Blood (GM12878) 46000319 4530 108416908
chr19 45994866 45995819 ZNF274 GTRD no Liver (HepG2) 46000319 4500 108416909
chr19 45994871 45995775 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4544 108416910
chr19 45994880 45995640 ZNF274 GTRD no Blood (GM12878) 46000319 4679 108416911
chr19 45994881 45995776 ZNF274 GTRD no Liver (HepG2) 46000319 4543 108416912
chr19 45994881 45996037 TCF7L2 GTRD no Colon (HCT116) 46000319 4282 108416913
chr19 45994883 45995859 ZNF274 GTRD no Liver (HepG2) 46000319 4460 108416914
chr19 45994893 45995873 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4446 108416915
chr19 45994895 45995593 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4726 108416916
chr19 45994898 45995885 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4434 108416917
chr19 45994904 45995734 ZNF274 GTRD no Bone Marrow (K562) 46000319 4585 108416918
chr19 45994904 45995944 ZNF274 GTRD no Bone Marrow (K562) 46000319 4375 108416919
chr19 45994907 45995697 ZNF274 GTRD no Liver (HepG2) 46000319 4622 108416920
chr19 45994908 45995567 ZNF274 GTRD no Bone Marrow (K562) 46000319 4752 108416921
chr19 45994908 45995569 ZNF274 GTRD no Bone Marrow (K562) 46000319 4750 108416922
chr19 45994912 45995691 ZNF274 GTRD no Liver (HepG2) 46000319 4628 108416923
chr19 45994913 45995666 ZNF274 GTRD no Blood (GM12878) 46000319 4653 108416924
chr19 45994918 45995825 TCF7L2 GTRD no Colon (HCT116) 46000319 4494 108416925
chr19 45994918 45995874 TCF7L2 GTRD no Colon (HCT116) 46000319 4445 108416926
chr19 45994920 45995813 ZBTB33 GTRD no Lung (A549) 46000319 4506 108416927
chr19 45994920 45995899 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4420 108416928
chr19 45994920 45995914 TCF7L2 GTRD no Colon (HCT116) 46000319 4405 108416929
chr19 45994927 45995655 ZNF274 GTRD no Liver (HepG2) 46000319 4664 108416930
chr19 45994931 45995662 ZNF274 GTRD no Blood (GM12878) 46000319 4657 108416931
chr19 45994932 45995599 ZNF274 GTRD no Blood (GM12878) 46000319 4720 108416932
chr19 45994936 45995808 ZNF274 GTRD no Blood (GM12878) 46000319 4511 108416933
chr19 45994940 45995932 ZBTB33 GTRD no Lung (A549) 46000319 4387 108416934
chr19 45994941 45995597 FLI1 GTRD no Muscle (A673) 46000319 4722 108416935
chr19 45994943 45995567 ZNF274 GTRD no Blood (GM12878) 46000319 4752 108416936
chr19 45994943 45995653 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4666 108416937
chr19 45994943 45995850 TCF7L2 GTRD no Colon (HCT116) 46000319 4469 108416938
chr19 45994945 45995840 ZNF274 GTRD no Blood (GM12878) 46000319 4479 108416939
chr19 45994946 45995704 TCF7L2 GTRD no Colon (HCT116) 46000319 4615 108416940
chr19 45994948 45995633 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4686 108416941
chr19 45994949 45995627 ZNF274 GTRD no Blood (GM12878) 46000319 4692 108416942
chr19 45994949 45996011 ZNF274 GTRD no Bone Marrow (K562) 46000319 4308 108416943
chr19 45994973 45995551 ZNF274 GTRD no Blood (GM12878) 46000319 4768 108416944
chr19 45994997 45995632 ZNF274 GTRD no Blood (GM12878) 46000319 4687 108416945
chr19 45995013 45995680 ZNF274 GTRD no Liver (HepG2) 46000319 4639 108416946
chr19 45995043 45995741 ZNF274 GTRD no Blood (GM12878) 46000319 4578 108416947
chr19 45995069 45995644 ZNF274 GTRD no Blood (GM12878) 46000319 4675 108416948
chr19 45995162 45995736 ZNF274 GTRD no Cervix (HeLa-S3) 46000319 4583 108416949
chr19 45995247 45995791 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4528 108416950
chr19 45995257 45996411 ZNF274 GTRD no Bone Marrow (K562) 46000319 3908 108416951
chr19 45995263 45995626 ZNF274 GTRD no Liver (HepG2) 46000319 4693 108416952
chr19 45995286 45995718 ZNF274 GTRD no Bone Marrow (K562) 46000319 4601 108416953
chr19 45995332 45995826 ZNF274 GTRD no Liver (HepG2) 46000319 4493 108416954
chr19 45995338 45995714 ZNF274 GTRD no Liver (HepG2) 46000319 4605 108416955
chr19 45995339 45995786 ZNF274 GTRD no Blood (GM12878) 46000319 4533 108416956
chr19 45995342 45995793 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4526 108416957
chr19 45995349 45995848 ZBTB33 GTRD no Brain (SK-N-SH) 46000319 4471 108416958
chr19 45995363 45995787 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4532 108416959
chr19 45995372 45996428 ZNF274 GTRD no Bone Marrow (K562) 46000319 3891 108416960
chr19 45995377 45995941 ZNF143 GTRD no Epithelial (MCF-7) 46000319 4378 108416961
chr19 45995380 45996422 ZNF274 GTRD no Bone Marrow (K562) 46000319 3897 108416962
chr19 45995571 45995585 PLAG1 JASPAR yes 46000319 4734 70858380
chr19 45995577 45995588 E2F1 JASPAR yes 46000319 4731 70858381
chr19 45995578 45995583 SP1 TRANSFAC yes 46000319 4736 70858382
chr19 45995578 45995589 E2F4 JASPAR yes 46000319 4730 70858383
chr19 45995578 45995589 E2F6 JASPAR yes 46000319 4730 70858384
chr19 45995579 45995584 SP1 TRANSFAC yes 46000319 4735 70858385
chr19 45995587 45995598 USF1 JASPAR yes 46000319 4721 70858386
chr19 45995587 45995598 USF2 JASPAR yes 46000319 4721 70858387
chr19 45995588 45995598 SREBF2 JASPAR yes 46000319 4721 70858388
chr19 45995590 45995595 USF2 TRANSFAC yes 46000319 4724 70858389
chr19 45995620 45995624 NFE TRANSFAC yes 46000319 4695 70858390
chr19 45995626 45995638 FOXI1 JASPAR yes 46000319 4681 70858391
chr19 45995636 45995650 POU1F1 JASPAR yes 46000319 4669 70858392
chr19 45995638 45995649 PROP1 JASPAR yes 46000319 4670 70858393
chr19 45995642 45995661 PAX5 JASPAR yes 46000319 4658 70858394
chr19 45995650 45995667 ESR1 JASPAR yes 46000319 4652 70858395
chr19 45995651 45995661 SP1 JASPAR yes 46000319 4658 70858396
chr19 45995651 45995666 ESR2 JASPAR yes 46000319 4653 70858397
chr19 45995651 45995671 ESR1 JASPAR yes 46000319 4648 70858398
chr19 45995651 45996439 ZNF274 GTRD no Bone Marrow (K562) 46000319 3880 108416963
chr19 45995654 45996543 ZNF274 GTRD no Bone Marrow (K562) 46000319 3776 108416964
chr19 45995660 45995675 TFAP2A JASPAR yes 46000319 4644 70858399
chr19 45995687 45996263 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 4056 108416965
chr19 45995696 45995714 RARA JASPAR yes 46000319 4605 70858400
chr19 45995697 45995705 TBX15 JASPAR yes 46000319 4614 70858401
chr19 45995697 45995708 E2F6 JASPAR yes 46000319 4611 70858402
chr19 45995698 45995703 SP1 TRANSFAC yes 46000319 4616 70858403
chr19 45995715 45995728 ZBTB18 JASPAR yes 46000319 4591 70858404
chr19 45995717 45995727 FIGLA JASPAR yes 46000319 4592 70858405
chr19 45995717 45995727 ID4 JASPAR yes 46000319 4592 70858406
chr19 45995717 45995727 TCF3 JASPAR yes 46000319 4592 70858407
chr19 45995717 45995727 TCF4 JASPAR yes 46000319 4592 70858408
chr19 45995735 45996509 ZNF274 GTRD no Bone Marrow (K562) 46000319 3810 108416966
chr19 45998479 45999451 ZBTB33 GTRD no Lung (A549) 46000319 868 108416967
chr19 45998731 46000466 ZNF274 GTRD no Blood (GM12878) 46000319 147 108416968
chr19 45998746 45999681 ZNF274 GTRD no Bone Marrow (K562) 46000319 638 108416969
chr19 45998778 46000285 ZNF274 GTRD no Bone Marrow (K562) 46000319 34 108416970
chr19 45998885 46000262 ZNF274 GTRD no Bone Marrow (K562) 46000319 57 108416971
chr19 45998901 46000172 ZNF274 GTRD no Bone Marrow (K562) 46000319 147 108416972
chr19 45999101 46000210 TCF7L2 GTRD no Colon (HCT116) 46000319 109 108416973
chr19 45999122 46001434 TCF7L2 GTRD no Colon (HCT116) 46000319 1115 108416974
chr19 45999188 46000100 ZNF143 GTRD no Epithelial (MCF-7) 46000319 219 108416975
chr19 45999191 45999435 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46000319 884 108416976
chr19 45999191 46000145 REST UCSC Txn Factor no Conserved 46000319 174 108416977
chr19 45999208 46000179 ZNF143 GTRD no Epithelial (MCF-7) 46000319 140 108416978
chr19 45999208 46000274 ZNF274 GTRD no Bone Marrow (K562) 46000319 45 108416979
chr19 45999209 45999949 ZNF274 GTRD no Bone Marrow (K562) 46000319 370 108416980
chr19 45999227 46000068 TCF7L2 GTRD no Colon (HCT116) 46000319 251 108416981
chr19 45999239 45999410 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 909 108416982
chr19 45999251 46001333 ZNF274 GTRD no Blood (GM12878) 46000319 1014 108416983
chr19 45999308 46000145 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 46000319 174 108416984
chr19 45999324 45999331 JUN TRANSFAC yes 46000319 988 70858409
chr19 45999412 45999422 RUNX3 JASPAR yes 46000319 897 70858410
chr19 45999413 45999422 RUNX2 JASPAR yes 46000319 897 70858411
chr19 45999417 46000067 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 46000319 252 108416985
chr19 45999421 45999435 IRF8 JASPAR yes 46000319 884 70858412
chr19 45999422 45999436 STAT1 JASPAR yes 46000319 883 70858413
chr19 45999422 45999437 STAT2 JASPAR yes 46000319 882 70858414
chr19 45999426 45999431 MYB TRANSFAC yes 46000319 888 70858415
chr19 45999426 46000086 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 46000319 233 108416986
chr19 45999428 45999933 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 386 108416987
chr19 45999437 45999442 SP1 TRANSFAC yes 46000319 877 70858416
chr19 45999437 46000017 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46000319 302 108416988
chr19 45999439 46000211 ZNF274 GTRD no Bone Marrow (K562) 46000319 108 108416989
chr19 45999440 46000096 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 46000319 223 108416990
chr19 45999461 45999473 NHLH1 JASPAR yes 46000319 846 70858417
chr19 45999462 45999472 NHLH1 JASPAR yes 46000319 847 70858418
chr19 45999468 45999473 TFAP2A TRANSFAC yes 46000319 846 70858419
chr19 45999468 45999474 MZF1 JASPAR yes 46000319 845 70858420
chr19 45999479 46000019 ZNF274 GTRD no Blood (GM12878) 46000319 300 108416991
chr19 45999482 45999970 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 46000319 349 108416992
chr19 45999494 45999507 NFKB2 JASPAR yes 46000319 812 70858421
chr19 45999495 45999506 NFKB1 JASPAR yes 46000319 813 70858422
chr19 45999495 45999991 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 328 108416993
chr19 45999501 45999507 MZF1 JASPAR yes 46000319 812 70858423
chr19 45999507 46000139 ZNF274 GTRD no Bone Marrow (K562) 46000319 180 108416994
chr19 45999509 46000053 ZNF274 GTRD no Bone Marrow (K562) 46000319 266 108416995
chr19 45999511 46000191 ZNF274 GTRD no Blood (GM12878) 46000319 128 108416996
chr19 45999514 45999518 YY1 TRANSFAC yes 46000319 801 70858424
chr19 45999515 45999527 HNF1B JASPAR yes 46000319 792 70858425
chr19 45999517 45999520 MYB TRANSFAC yes 46000319 799 70858426
chr19 45999518 45999954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 46000319 365 108416997
chr19 45999520 46000190 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46000319 129 108416998
chr19 45999527 46000051 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 268 108416999
chr19 45999536 46000089 ZNF274 GTRD no Bone Marrow (K562) 46000319 230 108417000
chr19 45999539 45999979 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 46000319 340 108417001
chr19 45999544 46000130 ZNF274 GTRD no Bone Marrow (K562) 46000319 189 108417002
chr19 45999545 45999556 NFE2 JASPAR yes 46000319 763 70858427
chr19 45999545 45999855 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 46000319 464 108417003
chr19 45999549 45999966 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 46000319 353 108417004
chr19 45999555 45999567 INSM1 JASPAR yes 46000319 752 70858428
chr19 45999557 45999957 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 46000319 362 108417005
chr19 45999561 46000258 ZNF274 GTRD no Blood (GM12878) 46000319 61 108417006
chr19 45999562 46000155 ZNF274 GTRD no Liver (HepG2) 46000319 164 108417007
chr19 45999570 45999576 YY1 JASPAR yes 46000319 743 70858429
chr19 45999570 45999960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 46000319 359 108417008
chr19 45999570 46000659 MAZ UCSC Txn Factor no Conserved 46000319 340 108417009
chr19 45999571 46000007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 46000319 312 108417010
chr19 45999571 46000169 ZNF274 GTRD no Blood (GM12878) 46000319 150 108417011
chr19 45999575 45999933 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 46000319 386 108417012
chr19 45999576 45999584 FOXO3 JASPAR yes 46000319 735 70858430
chr19 45999579 45999869 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 450 108417013
chr19 45999581 46000100 TCF7L2 GTRD no Colon (HCT116) 46000319 219 108417014
chr19 45999582 45999912 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 46000319 407 108417015
chr19 45999582 45999938 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 46000319 381 108417016
chr19 45999590 45999880 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46000319 439 108417017
chr19 45999591 46000167 ZNF274 GTRD no Bone Marrow (K562) 46000319 152 108417018
chr19 45999592 46000110 ZNF274 GTRD no Bone Marrow (K562) 46000319 209 108417019
chr19 45999595 45999923 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 46000319 396 108417020
chr19 45999599 46000109 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 46000319 210 108417021
chr19 45999599 46000215 ZNF274 GTRD no Bone Marrow (K562) 46000319 104 108417022
SNPs associated with RTN2[ENSG00000125744.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of RTN2[ENSG00000125744.7]
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Genomic Location chr19:45988547-46000319[-]
TSS 46000319
Gene Name RTN2
Ensembl ID ENSG00000125744.7
ENTREZID 6253
Uniprot
Q6GMT0
O75298
A8K7F2
Protein Name
isoform CRA_f
Reticulon
Reticulon 2
Reticulon-2
Truncated RTN2-A2
Expression levels of RTN2[ENSG00000125744.7]
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