EnhancerDB
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Enhancers that regulate CRB3[ENSG00000130545.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 6394891 6395218 vista28432 6463788 68570
VISTA
chr19 6400885 6405475 enh52840 6463788 58313
Liver (HepG2) Large Intestine
chr19 6423549 6423953 vista28433 6463788 39835
VISTA
chr19 6462383 6462634 vista28434 6463788 1154
VISTA
chr19 6487825 6491975 enh107750 6463788 24037
Blood (T-cell)
chr19 6489533 6489689 vista28435 6463788 25745
VISTA
chr19 6507925 6512075 enh92819 6463788 44137
Liver (HepG2)
chr19 6514165 6524712 enh4984 6463788 50377
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Uterus Blood (T-cell) Stomach
chr19 6516969 6517178 vista28436 6463788 53181
VISTA
chr19 6518032 6518368 vista28437 6463788 54244
VISTA
chr19 6526925 6534410 enh4985 6463788 63137
Blood (T-cell) Blood (Karpas-422)
chr19 6528964 6529120 vista28438 6463788 65176
VISTA
chr19 6535385 6540520 enh4986 6463788 71597
Prostate (PC-3) Cervix (HeLa-S3) Blood (OCI-LY7) Peripheral Blood (MM.1S) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
chr19 6539979 6540238 vista28439 6463788 76191
VISTA
chr19 6545685 6555175 enh4987 6463788 81897
Bone Marrow (K562) Cervix (HeLa-S3) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422)
chr19 6556475 6556744 vista28440 6463788 92687
VISTA
Transcript facotrs that regulate CRB3[ENSG00000130545.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 6461895 6462621 ZNF274 GTRD no Blood (GM12878) 6463788 1167 108377944
chr19 6462099 6462919 P63 GTRD no Skin (Keratinocyte) 6463788 869 108377945
chr19 6462129 6463082 P63 GTRD no Skin (Keratinocyte) 6463788 706 108377946
chr19 6462187 6462892 P63 GTRD no Skin (Keratinocyte) 6463788 896 108377947
chr19 6462302 6462864 ZNF274 GTRD no Bone Marrow (K562) 6463788 924 108377948
chr19 6462377 6462926 ZNF274 GTRD no Bone Marrow (K562) 6463788 862 108377949
chr19 6462390 6462401 E2F6 JASPAR yes 6463788 1387 70794584
chr19 6462409 6462421 TEAD1 JASPAR yes 6463788 1367 70794585
chr19 6462420 6462431 E2F4 JASPAR yes 6463788 1357 70794586
chr19 6462420 6462431 E2F6 JASPAR yes 6463788 1357 70794587
chr19 6462421 6462432 E2F1 JASPAR yes 6463788 1356 70794588
chr19 6462424 6462431 SP1 TRANSFAC yes 6463788 1357 70794589
chr19 6462425 6462430 SP1 TRANSFAC yes 6463788 1358 70794590
chr19 6462425 6462431 SP1 TRANSFAC yes 6463788 1357 70794591
chr19 6462434 6462442 TBX5 JASPAR yes 6463788 1346 70794592
chr19 6462448 6462455 NKX3-1 JASPAR yes 6463788 1333 70794593
chr19 6462469 6462480 FOXB1 JASPAR yes 6463788 1308 70794594
chr19 6462469 6462480 FOXC1 JASPAR yes 6463788 1308 70794595
chr19 6462470 6462478 FOXO3 JASPAR yes 6463788 1310 70794596
chr19 6462470 6462480 NFATC3 JASPAR yes 6463788 1308 70794597
chr19 6462500 6462508 GMEB2 JASPAR yes 6463788 1280 70794598
chr19 6462506 6462782 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 6463788 1006 108377950
chr19 6462507 6462520 ZBTB18 JASPAR yes 6463788 1268 70794599
chr19 6462509 6462518 SNAI2 JASPAR yes 6463788 1270 70794600
chr19 6462509 6462519 ID4 JASPAR yes 6463788 1269 70794601
chr19 6462509 6462519 TCF3 JASPAR yes 6463788 1269 70794602
chr19 6462509 6462519 TCF4 JASPAR yes 6463788 1269 70794603
chr19 6462511 6462520 ZEB1 JASPAR yes 6463788 1268 70794604
chr19 6462512 6462520 TBX5 JASPAR yes 6463788 1268 70794605
chr19 6462530 6462534 YY1 TRANSFAC yes 6463788 1254 70794606
chr19 6462530 6462541 HOXC13 JASPAR yes 6463788 1247 70794607
chr19 6462551 6462564 NFKB1 JASPAR yes 6463788 1224 70794608
chr19 6462551 6462564 NFKB2 JASPAR yes 6463788 1224 70794609
chr19 6462552 6462562 NFKB1 JASPAR yes 6463788 1226 70794610
chr19 6462552 6462563 NFKB1 JASPAR yes 6463788 1225 70794611
chr19 6462553 6462563 NFKB1 JASPAR yes 6463788 1225 70794612
chr19 6462553 6462563 RELA JASPAR yes 6463788 1225 70794613
chr19 6462553 6462563 REL JASPAR yes 6463788 1225 70794614
chr19 6462553 6462570 BCL6B JASPAR yes 6463788 1218 70794615
chr19 6462562 6462566 H1TF2 TRANSFAC yes 6463788 1222 70794616
chr19 6462562 6462566 NFE TRANSFAC yes 6463788 1222 70794617
chr19 6462562 6462566 SRF TRANSFAC yes 6463788 1222 70794618
chr19 6462579 6462583 YY1 TRANSFAC yes 6463788 1205 70794619
chr19 6462579 6462593 RXRG JASPAR yes 6463788 1195 70794620
chr19 6462612 6462624 GRHL1 JASPAR yes 6463788 1164 70794621
SNPs associated with CRB3[ENSG00000130545.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr19 5522325 rs61516250 CT C 941463 Esophagus 0.24495 5409646
chr19 5830302 rs778809 G A 633486 Pancreas 0.205837 5411083
chr19 5478247 rs364382 C G 985541 Uterus 0.35506 5409390
chr19 7251158 rs34269817 G A 783926 Thyroid 0.0819472 5420326
chr19 6581715 rs7259857 T C 114483 Stomach 0.233124 5415560
chr19 7460859 rs4804577 A T 993627 Adrenal 0.370461 5421671
Details of CRB3[ENSG00000130545.11]
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Genomic Location chr19:6463788-6467232[+]
TSS 6463788
Gene Name CRB3
Ensembl ID ENSG00000130545.11
ENTREZID 92359
Uniprot
Q9BUF7
Protein Name
Protein crumbs homolog 3
Expression levels of CRB3[ENSG00000130545.11]
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