EnhancerDB
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Enhancers that regulate SLC38A2[ENSG00000134294.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 46691205 46699071 enh68133 46766650 67579
Muscle (Myoblast) Muscle (A673) Neural Stem Cells (H9) Brain (SK-N-MC)
chr12 46711813 46715963 enh68134 46766650 50687
Neural Stem Cells (H9)
chr12 46720225 46728315 enh80189 46766650 38335
Prostate (PC-3) Ovary
chr12 46734425 46739495 enh75028 46766650 27155
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Muscle (A673) Uterus Stomach
chr12 46745990 46751055 enh86100 46766650 15595
Colon (HCT116)
chr12 46774225 46791355 enh14675 46766650 7575
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 46786554 46786766 vista13218 46766650 19904
VISTA
chr12 46792249 46810655 enh47577 46766650 25599
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
chr12 46797992 46798094 vista13219 46766650 31342
VISTA
chr12 46798246 46798498 vista13220 46766650 31596
VISTA
chr12 46804431 46804731 vista13221 46766650 37781
VISTA
chr12 46809510 46809878 vista13222 46766650 42860
VISTA
chr12 46820955 46858735 enh14676 46766650 54305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 46824163 46824471 vista13223 46766650 57513
VISTA
chr12 46825426 46825886 vista13224 46766650 58776
VISTA
chr12 46832663 46832984 vista13225 46766650 66013
VISTA
chr12 46844808 46845174 vista13226 46766650 78158
VISTA
chr12 46845656 46846014 vista13227 46766650 79006
VISTA
chr12 46848355 46848425 vista13228 46766650 81705
VISTA
chr12 46859389 46872155 enh14677 46766650 92739
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript facotrs that regulate SLC38A2[ENSG00000134294.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SLC38A2[ENSG00000134294.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 47505325 rs117116097 G A 738675 Esophagus 0.270335 2609139
chr12 46784744 rs4768118 T C 18094 Esophagus 0.240892 2603566
chr12 47617770 rs142824499 A G 851120 Heart 0.130398 2610100
chr12 47518047 rs76953085 A G 751397 Breast 0.0182545 2609273
chr12 47617770 rs142824499 A G 851120 Spleen 0.435647 2610100
chr12 47630799 rs112385269 G A 864149 Ovary 0.381228 2610258
chr12 46786778 rs75867205 A T 20128 Uterus 0.358231 2603583
chr12 46061150 rs61924049 C G 690822 Stomach 0.178667 2599276
chr12 45986471 rs2193748 G C 765501 Adrenal 0.120072 2598892
Details of SLC38A2[ENSG00000134294.9]
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Genomic Location chr12:46751972-46766650[-]
TSS 46766650
Gene Name SLC38A2
Ensembl ID ENSG00000134294.9
ENTREZID 54407
Uniprot
A0A024R0W3
Q96QD8
Q8NHT5
Protein Name
isoform CRA_b
member 2
Sodium-coupled neutral amino acid transporter 2
Solute carrier family 38
Expression levels of SLC38A2[ENSG00000134294.9]
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