EnhancerDB
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Enhancers that regulate SCYL1[ENSG00000142186.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 65180298 65217415 enh1825 65292548 75133
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr11 65220740 65221001 vista10601 65292548 71547
VISTA
chr11 65225145 65229295 enh90900 65292548 63253
Bone Marrow (K562)
chr11 65232865 65270235 enh1826 65292548 22313
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 65234874 65235172 vista10602 65292548 57376
VISTA
chr11 65238917 65239096 vista10603 65292548 53452
VISTA
chr11 65239550 65239870 vista10604 65292548 52678
VISTA
chr11 65244638 65245303 vista10605 65292548 47245
VISTA
chr11 65246279 65246484 vista10606 65292548 46064
VISTA
chr11 65248969 65249218 vista10607 65292548 43330
VISTA
chr11 65249962 65250245 vista10608 65292548 42303
VISTA
chr11 65252951 65253044 vista10609 65292548 39504
VISTA
chr11 65254704 65258394 vista291 65292548 34154
VISTA
chr11 65254949 65255610 vista10610 65292548 36938
VISTA
chr11 65256318 65257363 vista10611 65292548 35185
VISTA
chr11 65257502 65257849 vista10612 65292548 34699
VISTA
chr11 65259217 65259522 vista10613 65292548 33026
VISTA
chr11 65259637 65259913 vista10614 65292548 32635
VISTA
chr11 65259930 65260851 vista10615 65292548 31697
VISTA
chr11 65261229 65261625 vista10616 65292548 30923
VISTA
chr11 65261988 65262329 vista10617 65292548 30219
VISTA
chr11 65263684 65264604 vista10618 65292548 27944
VISTA
chr11 65264635 65265953 vista10619 65292548 26595
VISTA
chr11 65270985 65280693 enh1827 65292548 11855
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr11 65273934 65274467 vista10620 65292548 18081
VISTA
chr11 65290857 65291092 vista10621 65292548 1456
VISTA
chr11 65313085 65317235 enh47495 65292548 20537
Thymus
chr11 65318325 65323055 enh107511 65292548 25777
Blood (T-cell)
chr11 65323331 65323567 vista10622 65292548 30783
VISTA
chr11 65328084 65328375 vista10623 65292548 35536
VISTA
chr11 65333490 65333816 vista10624 65292548 40942
VISTA
chr11 65342581 65342818 vista10625 65292548 50033
VISTA
chr11 65349705 65358435 enh1828 65292548 57157
Brain (SK-N-SH) Esophagus Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Heart
chr11 65379476 65379605 vista10626 65292548 86928
VISTA
Transcript facotrs that regulate SCYL1[ENSG00000142186.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 65290145 65291262 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 1286 107980376
chr11 65290267 65293061 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 513 107980377
chr11 65290329 65291412 TEF1 GTRD no Bone (Osteoblast) 65292548 1136 107980378
chr11 65290354 65292988 ZNF274 GTRD no Blood (GM12878) 65292548 440 107980379
chr11 65290409 65293108 ZNF274 GTRD no Blood (GM12878) 65292548 560 107980380
chr11 65290440 65291270 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 1278 107980381
chr11 65290443 65291975 ZNF274 GTRD no Blood (GM12878) 65292548 573 107980382
chr11 65290446 65293060 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 512 107980383
chr11 65290450 65292046 ZNF274 GTRD no Blood (GM12878) 65292548 502 107980384
chr11 65290467 65291270 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 1278 107980385
chr11 65290500 65291357 ZNF274 GTRD no Bone Marrow (K562) 65292548 1191 107980386
chr11 65290502 65292000 ZNF274 GTRD no Blood (GM12878) 65292548 548 107980387
chr11 65290507 65292947 ZBTB33 GTRD no Lung (A549) 65292548 399 107980388
chr11 65290520 65292974 ZBTB33 GTRD no Lung (A549) 65292548 426 107980389
chr11 65290522 65290892 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 65292548 1656 107980390
chr11 65290537 65292092 ZBTB33 GTRD no Lung (A549) 65292548 456 107980391
chr11 65290538 65291305 ZNF274 GTRD no Blood (GM12878) 65292548 1243 107980392
chr11 65290541 65291208 ZNF274 GTRD no Blood (GM12878) 65292548 1340 107980393
chr11 65290550 65290914 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 65292548 1634 107980394
chr11 65290551 65293123 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 575 107980395
chr11 65290553 65291865 ZNF274 GTRD no Blood (GM12878) 65292548 683 107980396
chr11 65290554 65292815 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 267 107980397
chr11 65290559 65291251 ZNF274 GTRD no Blood (GM12878) 65292548 1297 107980398
chr11 65290559 65293055 ZBTB33 GTRD no Lung (A549) 65292548 507 107980399
chr11 65290571 65291954 ZNF274 GTRD no Blood (GM12878) 65292548 594 107980400
chr11 65290573 65293089 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 541 107980401
chr11 65290575 65291355 ZNF274 GTRD no Blood (GM12878) 65292548 1193 107980402
chr11 65290577 65291271 ZNF274 GTRD no Blood (GM12878) 65292548 1277 107980403
chr11 65290586 65290862 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 65292548 1686 107980404
chr11 65290600 65291884 ZNF274 GTRD no Blood (GM12878) 65292548 664 107980405
chr11 65290601 65291277 ZNF274 GTRD no Bone Marrow (K562) 65292548 1271 107980406
chr11 65290603 65291275 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 1273 107980407
chr11 65290608 65291880 ZNF274 GTRD no Blood (GM12878) 65292548 668 107980408
chr11 65290622 65291218 ZNF274 GTRD no Bone Marrow (K562) 65292548 1330 107980409
chr11 65290623 65291385 ZNF274 GTRD no Blood (GM12878) 65292548 1163 107980410
chr11 65290635 65291124 ZNF274 GTRD no Bone Marrow (K562) 65292548 1424 107980411
chr11 65290646 65291186 ZNF274 GTRD no Bone Marrow (K562) 65292548 1362 107980412
chr11 65290654 65292024 ZBTB33 GTRD no Lung (A549) 65292548 524 107980413
chr11 65290667 65291208 ZNF274 GTRD no Blood (GM12878) 65292548 1340 107980414
chr11 65290667 65291255 ZNF274 GTRD no Bone Marrow (K562) 65292548 1293 107980415
chr11 65290679 65291057 ZNF274 GTRD no Blood (GM12878) 65292548 1491 107980416
chr11 65290679 65291135 ZNF274 GTRD no Bone Marrow (K562) 65292548 1413 107980417
chr11 65290684 65291088 ZNF274 GTRD no Blood (GM12878) 65292548 1460 107980418
chr11 65290685 65291392 ZNF274 GTRD no Blood (GM12878) 65292548 1156 107980419
chr11 65290714 65291395 ZNF274 GTRD no Bone Marrow (K562) 65292548 1153 107980420
chr11 65290717 65293053 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 505 107980421
chr11 65290727 65291046 ZNF274 GTRD no Bone Marrow (K562) 65292548 1502 107980422
chr11 65290737 65291984 ZBTB33 GTRD no Lung (A549) 65292548 564 107980423
chr11 65290738 65291054 ZBTB33 GTRD no Lung (A549) 65292548 1494 107980424
chr11 65290761 65291229 ZNF274 GTRD no Cervix (HeLa-S3) 65292548 1319 107980425
chr11 65290771 65291081 ZNF274 GTRD no Blood (GM12878) 65292548 1467 107980426
chr11 65290779 65291178 ZNF274 GTRD no Blood (GM12878) 65292548 1370 107980427
chr11 65290780 65291217 ZNF274 GTRD no Blood (GM12878) 65292548 1331 107980428
chr11 65290783 65291108 ZNF274 GTRD no Bone Marrow (K562) 65292548 1440 107980429
chr11 65290792 65291039 ZNF274 GTRD no Bone Marrow (K562) 65292548 1509 107980430
chr11 65290795 65291028 ZNF274 GTRD no Blood (GM12878) 65292548 1520 107980431
chr11 65290817 65291089 ZNF274 GTRD no Blood (GM12878) 65292548 1459 107980432
chr11 65290826 65291013 ZNF274 GTRD no Blood (GM12878) 65292548 1535 107980433
chr11 65290832 65291262 ZNF274 GTRD no Blood (GM12878) 65292548 1286 107980434
chr11 65290850 65291325 ZNF274 GTRD no Blood (GM12878) 65292548 1223 107980435
chr11 65290869 65290875 TCF4 TRANSFAC yes 65292548 1673 114087516
chr11 65290882 65290894 FOXI1 JASPAR yes 65292548 1654 114087517
chr11 65290892 65290907 STAT2 JASPAR yes 65292548 1641 114087518
chr11 65290922 65290932 ETV3 JASPAR yes 65292548 1616 114087519
chr11 65290922 65290932 ETV5 JASPAR yes 65292548 1616 114087520
chr11 65290922 65290933 SPDEF JASPAR yes 65292548 1615 114087521
chr11 65290922 65290934 ELF1 JASPAR yes 65292548 1614 114087522
chr11 65290923 65290932 ELK4 JASPAR yes 65292548 1616 114087523
chr11 65290929 65290933 LFA1 TRANSFAC yes 65292548 1615 114087524
chr11 65290951 65290965 FOXF2 JASPAR yes 65292548 1583 114087525
chr11 65290951 65290967 POU4F2 JASPAR yes 65292548 1581 114087526
chr11 65290951 65290967 POU4F3 JASPAR yes 65292548 1581 114087527
chr11 65290953 65290957 YY1 TRANSFAC yes 65292548 1591 114087528
chr11 65290953 65290963 HOXC10 JASPAR yes 65292548 1585 114087529
chr11 65290953 65290963 HOXD11 JASPAR yes 65292548 1585 114087530
chr11 65290953 65290967 POU4F1 JASPAR yes 65292548 1581 114087531
chr11 65290965 65290976 DUX4 JASPAR yes 65292548 1572 114087532
chr11 65290968 65290973 ETS2 TRANSFAC yes 65292548 1575 114087533
chr11 65290976 65291240 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 65292548 1308 107980436
chr11 65290982 65290990 FOXO3 JASPAR yes 65292548 1558 114087534
chr11 65290984 65291005 ZNF263 JASPAR yes 65292548 1543 114087535
chr11 65290986 65290997 NRL JASPAR yes 65292548 1551 114087536
chr11 65290989 65291002 NR2F1 JASPAR yes 65292548 1546 114087537
chr11 65290991 65291002 ESRRA JASPAR yes 65292548 1546 114087538
chr11 65290992 65291000 NR4A2 JASPAR yes 65292548 1548 114087539
chr11 65290993 65291003 RORA JASPAR yes 65292548 1545 114087540
chr11 65290995 65291016 ZNF263 JASPAR yes 65292548 1532 114087541
chr11 65290999 65291013 E2F7 JASPAR yes 65292548 1535 114087542
chr11 65291036 65291057 IRF1 JASPAR yes 65292548 1491 114087543
chr11 65291039 65291053 IRF8 JASPAR yes 65292548 1495 114087544
chr11 65291040 65291046 GATA3 JASPAR yes 65292548 1502 114087545
chr11 65291040 65291055 PRDM1 JASPAR yes 65292548 1493 114087546
chr11 65291041 65291053 IRF1 JASPAR yes 65292548 1495 114087547
chr11 65291052 65291067 HNF1A JASPAR yes 65292548 1481 114087548
chr11 65291057 65291072 FOXA1 JASPAR yes 65292548 1476 114087549
SNPs associated with SCYL1[ENSG00000142186.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 66081171 rs1621469 A C 774996 Esophagus 0.201912 2052128
chr11 66181559 rs7131396 A G 875384 Esophagus 0.386646 2052739
chr11 65430398 rs139081674 G A 124223 Heart 0.055216 2047479
chr11 64631606 rs117506027 G A 660942 Pancreas 0.290471 2042330
chr11 65257082 rs12286952 C G 35466 Thyroid 0.27789 2046474
chr11 65257329 rs1152620 A G 35219 Stomach 0.242998 2046480
Details of SCYL1[ENSG00000142186.12]
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Genomic Location chr11:65292548-65306175[+]
TSS 65292548
Gene Name SCYL1
Ensembl ID ENSG00000142186.12
ENTREZID 57410
Uniprot
E9PK59
Q96KG9
Protein Name
N-terminal kinase-like protein
Expression levels of SCYL1[ENSG00000142186.12]
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