EnhancerDB
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Enhancers that regulate GATAD2B[ENSG00000143614.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 153811357 153817569 enh631 153895451 77882
Prostate (PC-3) Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422)
chr1 153818420 153818667 vista3358 153895451 76784
VISTA
chr1 153819840 153824635 enh632 153895451 70816
Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen
chr1 153824845 153829877 enh633 153895451 65574
Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (GM12878)
chr1 153824989 153825297 vista3359 153895451 70154
VISTA
chr1 153830805 153834955 enh92111 153895451 60496
Liver (HepG2)
chr1 153836845 153844235 enh74379 153895451 51216
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Muscle (A673) Peripheral Blood (MM.1S) Stomach
chr1 153841080 153841191 vista3360 153895451 54260
VISTA
chr1 153845025 153845089 vista3361 153895451 50362
VISTA
chr1 153846925 153851075 enh109354 153895451 44376
Stomach
chr1 153851506 153857979 enh634 153895451 37472
Brain (SK-N-SH) Prostate (RWPE1) Large Intestine Astrocyte Thyroid Blood (Karpas-422) Spleen Neural Stem Cells (H9)
chr1 153853385 153853782 vista3362 153895451 41669
VISTA
chr1 153858205 153863268 enh635 153895451 32183
Stomach Blood (T-cell) Blood (Karpas-422) Blood (GM12878)
chr1 153874585 153880274 enh27139 153895451 15177
Astrocyte Colon (HCT116) Cervix (HeLa-S3) Lung (PC-9)
chr1 153929776 153930098 vista3363 153895451 34325
VISTA
chr1 153933065 153938915 enh636 153895451 37614
Uterus Bone (Osteoblast) Blood (Karpas-422)
chr1 153936554 153936861 vista3364 153895451 41103
VISTA
chr1 153944125 153948275 enh637 153895451 48674
Blood (Karpas-422)
Transcript facotrs that regulate GATAD2B[ENSG00000143614.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GATAD2B[ENSG00000143614.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 153811367 rs10796958 T C 0 Esophagus 0.136461 636422
chr1 153966338 rs114155853 C T 70887 Heart 0.349736 637350
chr1 154245568 rs55857358 G A 350117 Pancreas 0.300707 637649
chr1 153332569 rs55827988 C T 444632 Ovary 0.999366 633194
chr1 154376820 rs66654715 G A,C 481369 Uterus 0.912886 638406
chr1 153148511 rs7534457 T C 628690 Lung 0.238662 632574
Details of GATAD2B[ENSG00000143614.7]
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Genomic Location chr1:153777201-153895451[-]
TSS 153895451
Gene Name GATAD2B
Ensembl ID ENSG00000143614.7
ENTREZID 57459
Uniprot
Q8WXI9
Protein Name
Transcriptional repressor p66-beta
Expression levels of GATAD2B[ENSG00000143614.7]
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