EnhancerDB
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Enhancers that regulate GRHL3[ENSG00000158055.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 24547385 24566755 enh11617 24645812 79057
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Liver Blood (GM12878) Placenta Lung (PC-9) Pancreas (Panc1) Uterus
chr1 24573485 24583535 enh42909 24645812 62277
Bone Marrow (K562) Spleen Muscle (Myotube)
chr1 24581337 24581604 vista773 24645812 64208
VISTA
chr1 24587365 24595994 enh11618 24645812 49818
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 24599645 24630859 enh11619 24645812 14953
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
chr1 24631970 24638719 enh66870 24645812 7093
Cervix (HeLa-S3) Prostate (RWPE1) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Neural Stem Cells (H9)
chr1 24650469 24654619 enh61816 24645812 4657
Esophagus
chr1 24676705 24680855 enh103006 24645812 30893
Peripheral Blood (MM.1S)
chr1 24680333 24680598 vista774 24645812 34521
VISTA
chr1 24691833 24692082 vista775 24645812 46021
VISTA
chr1 24704149 24722895 enh138 24645812 58337
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Stomach
chr1 24712127 24712358 vista776 24645812 66315
VISTA
chr1 24722613 24722643 vista777 24645812 76801
VISTA
chr1 24732584 24732754 vista778 24645812 86772
VISTA
chr1 24736156 24736250 vista779 24645812 90344
VISTA
Transcript facotrs that regulate GRHL3[ENSG00000158055.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 24650493 24650497 YY1 TRANSFAC yes 24645812 4681 27499716
chr1 24650515 24650527 FOXI1 JASPAR yes 24645812 4703 27499717
chr1 24650524 24650537 DUXA JASPAR yes 24645812 4712 27499718
chr1 24650527 24650538 FOS JASPAR yes 24645812 4715 27499719
chr1 24650529 24650535 JUN TRANSFAC yes 24645812 4717 27499720
chr1 24650540 24650554 POU4F1 JASPAR yes 24645812 4728 27499721
chr1 24650540 24650556 POU4F2 JASPAR yes 24645812 4728 27499722
chr1 24650540 24650556 POU4F3 JASPAR yes 24645812 4728 27499723
chr1 24650570 24650585 SCRT1 JASPAR yes 24645812 4758 27499724
chr1 24650574 24650583 SNAI2 JASPAR yes 24645812 4762 27499725
chr1 24650574 24650584 FIGLA JASPAR yes 24645812 4762 27499726
chr1 24650579 24650585 ZNF354C JASPAR yes 24645812 4767 27499727
chr1 24650582 24650587 H4TF1 TRANSFAC yes 24645812 4770 27499728
chr1 24650592 24650605 EOMES JASPAR yes 24645812 4780 27499729
chr1 24650594 24650604 TBR1 JASPAR yes 24645812 4782 27499730
chr1 24650594 24650605 TBX20 JASPAR yes 24645812 4782 27499731
chr1 24650594 24650605 TBX2 JASPAR yes 24645812 4782 27499732
chr1 24650595 24650605 TBX21 JASPAR yes 24645812 4783 27499733
chr1 24650595 24650609 PAX6 JASPAR yes 24645812 4783 27499734
chr1 24650596 24650604 MGA JASPAR yes 24645812 4784 27499735
chr1 24650596 24650604 TBX15 JASPAR yes 24645812 4784 27499736
chr1 24650596 24650604 TBX1 JASPAR yes 24645812 4784 27499737
chr1 24650596 24650604 TBX4 JASPAR yes 24645812 4784 27499738
chr1 24650596 24650604 TBX5 JASPAR yes 24645812 4784 27499739
chr1 24650604 24650609 MYC TRANSFAC yes 24645812 4792 27499740
chr1 24650609 24650618 SOX9 JASPAR yes 24645812 4797 27499741
chr1 24650617 24650638 ZNF263 JASPAR yes 24645812 4805 27499742
chr1 24650618 24650628 ZNF740 JASPAR yes 24645812 4806 27499743
chr1 24650621 24650642 ZNF263 JASPAR yes 24645812 4809 27499744
chr1 24650622 24650643 IRF1 JASPAR yes 24645812 4810 27499745
chr1 24650625 24650639 IRF7 JASPAR yes 24645812 4813 27499746
chr1 24650626 24650640 STAT1 JASPAR yes 24645812 4814 27499747
chr1 24650626 24650641 PRDM1 JASPAR yes 24645812 4814 27499748
chr1 24650626 24650641 STAT2 JASPAR yes 24645812 4814 27499749
chr1 24650630 24650635 ETS2 TRANSFAC yes 24645812 4818 27499750
chr1 24650664 24650678 TCF7L2 JASPAR yes 24645812 4852 27499751
chr1 24650664 24650679 LEF1 JASPAR yes 24645812 4852 27499752
chr1 24650668 24650674 TCF4 TRANSFAC yes 24645812 4856 27499753
chr1 24650678 24650696 SRF JASPAR yes 24645812 4866 27499754
chr1 24650690 24650695 ETS2 TRANSFAC yes 24645812 4878 27499755
chr1 24650697 24650712 MEF2C JASPAR yes 24645812 4885 27499756
chr1 24650698 24650713 MEF2A JASPAR yes 24645812 4886 27499757
chr1 24650699 24650711 MEF2A JASPAR yes 24645812 4887 27499758
chr1 24650700 24650710 MEF2A JASPAR yes 24645812 4888 27499759
chr1 24650717 24650732 PRDM1 JASPAR yes 24645812 4905 27499760
chr1 24650723 24650741 SRF JASPAR yes 24645812 4911 27499761
chr1 24650728 24650738 ALX3 JASPAR yes 24645812 4916 27499762
chr1 24650728 24650738 EMX1 JASPAR yes 24645812 4916 27499763
chr1 24650728 24650738 EMX2 JASPAR yes 24645812 4916 27499764
chr1 24650728 24650738 ESX1 JASPAR yes 24645812 4916 27499765
chr1 24650728 24650738 EVX2 JASPAR yes 24645812 4916 27499766
chr1 24650728 24650738 GBX1 JASPAR yes 24645812 4916 27499767
chr1 24650728 24650738 GSX1 JASPAR yes 24645812 4916 27499768
chr1 24650728 24650738 GSX2 JASPAR yes 24645812 4916 27499769
chr1 24650728 24650738 HOXA2 JASPAR yes 24645812 4916 27499770
chr1 24650728 24650738 HOXB2 JASPAR yes 24645812 4916 27499771
chr1 24650728 24650738 HOXB3 JASPAR yes 24645812 4916 27499772
chr1 24650728 24650738 LBX2 JASPAR yes 24645812 4916 27499773
chr1 24650728 24650738 LHX2 JASPAR yes 24645812 4916 27499774
chr1 24650728 24650738 LHX6 JASPAR yes 24645812 4916 27499775
chr1 24650728 24650738 MIXL1 JASPAR yes 24645812 4916 27499776
chr1 24650728 24650738 NOTO JASPAR yes 24645812 4916 27499777
chr1 24650729 24650737 EN1 JASPAR yes 24645812 4917 27499778
chr1 24650729 24650737 ISX JASPAR yes 24645812 4917 27499779
chr1 24650729 24650737 LBX1 JASPAR yes 24645812 4917 27499780
chr1 24650729 24650737 LHX9 JASPAR yes 24645812 4917 27499781
chr1 24650729 24650737 PAX4 JASPAR yes 24645812 4917 27499782
chr1 24650729 24650737 PDX1 JASPAR yes 24645812 4917 27499783
chr1 24650729 24650737 PRRX1 JASPAR yes 24645812 4917 27499784
chr1 24650729 24650737 RAX2 JASPAR yes 24645812 4917 27499785
chr1 24650729 24650737 SHOX JASPAR yes 24645812 4917 27499786
chr1 24650729 24650737 UNCX JASPAR yes 24645812 4917 27499787
chr1 24650729 24650737 VAX1 JASPAR yes 24645812 4917 27499788
chr1 24650729 24650737 VAX2 JASPAR yes 24645812 4917 27499789
chr1 24650729 24650737 VSX1 JASPAR yes 24645812 4917 27499790
chr1 24650729 24650737 VSX2 JASPAR yes 24645812 4917 27499791
chr1 24650731 24650751 PPARG JASPAR yes 24645812 4919 27499792
chr1 24650741 24650745 LFA1 TRANSFAC yes 24645812 4929 27499793
chr1 24650751 24650764 POU2F2 JASPAR yes 24645812 4939 27499794
chr1 24650752 24650764 POU3F1 JASPAR yes 24645812 4940 27499795
chr1 24650752 24650764 POU3F2 JASPAR yes 24645812 4940 27499796
chr1 24650752 24650765 POU3F3 JASPAR yes 24645812 4940 27499797
chr1 24650753 24650765 POU2F1 JASPAR yes 24645812 4941 27499798
chr1 24650754 24650763 POU5F1B JASPAR yes 24645812 4942 27499799
chr1 24650791 24650796 MYC TRANSFAC yes 24645812 4979 27499800
chr1 24650801 24650820 REST JASPAR yes 24645812 4989 27499801
chr1 24650803 24650812 ZEB1 JASPAR yes 24645812 4991 27499802
chr1 24650804 24650814 TCF4 JASPAR yes 24645812 4992 27499803
chr1 24650806 24650811 USF2 TRANSFAC yes 24645812 4994 27499804
chr1 24650812 24650816 H4TF2 TRANSFAC yes 24645812 5000 27499805
SNPs associated with GRHL3[ENSG00000158055.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 24532067 rs6696471 G A 113745 Esophagus 0.00253966 163640
chr1 25425629 rs706843 A G 734657 Esophagus 0.288296 171435
chr1 25361272 rs76938319 T A,C 670300 Heart 0.00131192 170674
chr1 25467972 rs112545363 A C,G 777000 Pancreas 0.280447 171782
chr1 24646378 rs2247991 G A 0 Breast 0.329893 164938
chr1 25273288 rs876109 T C 582316 Uterus 0.441781 169715
chr1 25275859 rs1293203 C T 584887 Thyroid 0.0623078 169740
chr1 24578473 rs56373434 CTAGTTTT C 67339 Liver 0.308221 164106
chr1 24510252 rs7546025 T C 135560 Lung 8.44377e-11 163310
chr1 25221624 rs114494147 T A 530652 Stomach 0.402366 169082
chr1 24653792 rs483202 A G 0 Adrenal 0.351519 164989
Details of GRHL3[ENSG00000158055.11]
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Genomic Location chr1:24645812-24690972[+]
TSS 24645812
Gene Name GRHL3
Ensembl ID ENSG00000158055.11
ENTREZID 57822
Uniprot
Q8TE85
Protein Name
Grainyhead-like protein 3 homolog
Expression levels of GRHL3[ENSG00000158055.11]
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