EnhancerDB
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Enhancers that regulate LMNA[ENSG00000160789.15]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 155967865 155975455 enh79219 156052364 76909
Prostate (PC-3) Brain (SK-N-MC) Liver (HepG2)
chr1 155976385 155980955 enh103107 156052364 71409
Peripheral Blood (MM.1S)
chr1 156017996 156022478 enh102386 156052364 29886
Bone (Osteoblast)
chr1 156059426 156062550 vista103 156052364 7062
VISTA
chr1 156063928 156076316 enh12294 156052364 11564
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 156065479 156069043 vista104 156052364 13115
VISTA
chr1 156066868 156067143 vista3441 156052364 14504
VISTA
chr1 156067665 156067930 vista3442 156052364 15301
VISTA
chr1 156072303 156076849 vista105 156052364 19939
VISTA
chr1 156072500 156072641 vista3443 156052364 20136
VISTA
chr1 156073142 156073699 vista3444 156052364 20778
VISTA
chr1 156073854 156074351 vista3445 156052364 21490
VISTA
chr1 156074715 156075305 vista3446 156052364 22351
VISTA
chr1 156080085 156084335 enh27147 156052364 27721
Astrocyte Stomach
chr1 156086105 156099215 enh12295 156052364 33741
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
chr1 156089405 156089622 vista3447 156052364 37041
VISTA
chr1 156095033 156095181 vista3448 156052364 42669
VISTA
chr1 156103413 156103690 vista3449 156052364 51049
VISTA
chr1 156114625 156118841 enh86816 156052364 62261
Stomach Blood (GM12878)
chr1 156118146 156118395 vista3450 156052364 65782
VISTA
chr1 156133837 156133883 vista3451 156052364 81473
VISTA
chr1 156133965 156139575 enh74383 156052364 81601
Muscle (A673) Peripheral Blood (MM.1S)
chr1 156134935 156135401 vista3452 156052364 82571
VISTA
chr1 156149465 156158450 enh12296 156052364 97101
Bone Marrow (K562) Liver (HepG2) Large Intestine Placenta Neural Stem Cells (H9)
Transcript facotrs that regulate LMNA[ENSG00000160789.15]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with LMNA[ENSG00000160789.15], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 155606906 rs147822223 G A,T 445458 Esophagus 0.0516296 645274
chr1 156403701 rs6662838 G A 293821 Esophagus 0.0502466 648346
chr1 156486009 rs6685228 G A 376129 Heart 0.0443767 649090
chr1 156111287 rs536857 A G 1407 Breast 0.405721 647220
chr1 156073174 rs553893559 G A 0 Spleen 0.066709 646836
Details of LMNA[ENSG00000160789.15]
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Genomic Location chr1:156052364-156109880[+]
TSS 156052364
Gene Name LMNA
Ensembl ID ENSG00000160789.15
ENTREZID 4000
Uniprot
Q5TCI8
P02545
Protein Name
Lamin A/C
Lamin A/C transcript variant 1
Prelamin-A/C
Prelamin-A/C [Cleaved into: Lamin-A/C
Expression levels of LMNA[ENSG00000160789.15]
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