EnhancerDB

Enhancers that regulate NCSTN[ENSG00000162736.11]

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears
chr1	160214925	160219075	enh87640	160313062	93987	Pancreas
chr1	160219285	160229475	enh43061	160313062	83587	Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Heart
chr1	160230168	160230604	vista3577	160313062	82458	VISTA
chr1	160242090	160242278	vista3578	160313062	70784	VISTA
chr1	160316870	160317108	vista3579	160313062	3808	VISTA
chr1	160332348	160332525	vista3580	160313062	19286	VISTA
chr1	160341585	160349639	enh675	160313062	28523	Bone Marrow (K562) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Blood (Karpas-422) Pancreas Heart
chr1	160344568	160344717	vista3581	160313062	31506	VISTA
chr1	160345693	160345986	vista3582	160313062	32631	VISTA
chr1	160371929	160383735	enh27155	160313062	58867	Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9) Thymus Stomach
chr1	160376163	160376541	vista3583	160313062	63101	VISTA
chr1	160377718	160378261	vista3584	160313062	64656	VISTA
chr1	160379189	160379307	vista3585	160313062	66127	VISTA
chr1	160396184	160404675	enh676	160313062	83122	Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (T-cell) Blood (Karpas-422)
chr1	160399608	160399975	vista3586	160313062	86546	VISTA
chr1	160402251	160402521	vista3587	160313062	89189	VISTA
chr1	160405290	160409955	enh677	160313062	92228	Blood (OCI-LY7) Large Intestine Thymus Blood (Karpas-422)
chr1	160407857	160407975	vista3588	160313062	94795	VISTA

Transcript facotrs that regulate NCSTN[ENSG00000162736.11]

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id
chr1	160316706	160317022	EBF1	UCSC Txn Factor	no	Conserved	160313062	3644	107839288
chr1	160316733	160317169	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3671	107839289
chr1	160316736	160317172	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3674	107839290
chr1	160316737	160317107	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3675	107839291
chr1	160316753	160317017	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3691	107839292
chr1	160316775	160317045	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3713	107839293
chr1	160316786	160317116	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3724	107839294
chr1	160316817	160317093	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3755	107839295
chr1	160316830	160317083	SPI1	UCSC Txn Factor	no	Conserved	160313062	3768	107839296
chr1	160316830	160317083	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3768	107839297
chr1	160316856	160317092	ZZZ3	ENCODE Uniform TFBS	no	Blood (GM12878)	160313062	3794	107839298
chr1	160316859	160317063	ZNF274	ENCODE Uniform TFBS	no	Bone Marrow (K562)	160313062	3797	107839299
chr1	160316871	160316886	MEF2C	JASPAR	yes		160313062	3809	118383382
chr1	160316914	160316924	MAX	JASPAR	yes		160313062	3852	118383383
chr1	160316914	160316925	USF1	JASPAR	yes		160313062	3852	118383384
chr1	160316914	160316925	USF2	JASPAR	yes		160313062	3852	118383385
chr1	160316914	160316926	HES5	JASPAR	yes		160313062	3852	118383386
chr1	160316914	160316926	HES7	JASPAR	yes		160313062	3852	118383387
chr1	160316915	160316925	BHLHE40	JASPAR	yes		160313062	3853	118383388
chr1	160316915	160316925	HEY1	JASPAR	yes		160313062	3853	118383389
chr1	160316915	160316925	HEY2	JASPAR	yes		160313062	3853	118383390
chr1	160316915	160316925	MAX	JASPAR	yes		160313062	3853	118383391
chr1	160316915	160316925	MLX	JASPAR	yes		160313062	3853	118383392
chr1	160316915	160316925	MNT	JASPAR	yes		160313062	3853	118383393
chr1	160316915	160316925	TFE3	JASPAR	yes		160313062	3853	118383394
chr1	160316915	160316925	TFEB	JASPAR	yes		160313062	3853	118383395
chr1	160316916	160316923	USF1	JASPAR	yes		160313062	3854	118383396
chr1	160316917	160316922	MYC	TRANSFAC	yes		160313062	3855	118383397
chr1	160316917	160316922	USF1	TRANSFAC	yes		160313062	3855	118383398
chr1	160316917	160316922	USF2	TRANSFAC	yes		160313062	3855	118383399
chr1	160316930	160316951	ZNF263	JASPAR	yes		160313062	3868	118383400
chr1	160316934	160316949	ZIC3	JASPAR	yes		160313062	3872	118383401
chr1	160316935	160316949	ZIC1	JASPAR	yes		160313062	3873	118383402
chr1	160316952	160316970	ESR1	JASPAR	yes		160313062	3890	118383403
chr1	160316962	160316973	FLI1	JASPAR	yes		160313062	3900	118383404
chr1	160316962	160316975	ELF3	JASPAR	yes		160313062	3900	118383405
chr1	160316963	160316973	ETV6	JASPAR	yes		160313062	3901	118383406
chr1	160316963	160316974	ELF5	JASPAR	yes		160313062	3901	118383407
chr1	160316963	160316975	EHF	JASPAR	yes		160313062	3901	118383408
chr1	160316963	160316975	ELF1	JASPAR	yes		160313062	3901	118383409
chr1	160316963	160316975	ELF4	JASPAR	yes		160313062	3901	118383410
chr1	160316963	160316976	ELF1	JASPAR	yes		160313062	3901	118383411
chr1	160316963	160316977	SPI1	JASPAR	yes		160313062	3901	118383412
chr1	160316963	160316977	SPIC	JASPAR	yes		160313062	3901	118383413
chr1	160316964	160316971	SPI1	JASPAR	yes		160313062	3902	118383414
chr1	160316964	160316972	EHF	JASPAR	yes		160313062	3902	118383415
chr1	160316967	160316977	POU6F2	JASPAR	yes		160313062	3905	118383416
chr1	160316968	160316978	GSX1	JASPAR	yes		160313062	3906	118383417
chr1	160316968	160316978	NOTO	JASPAR	yes		160313062	3906	118383418
chr1	160316969	160316977	NKX6-1	JASPAR	yes		160313062	3907	118383419
chr1	160316969	160316977	NKX6-2	JASPAR	yes		160313062	3907	118383420
chr1	160316971	160316975	YY1	TRANSFAC	yes		160313062	3909	118383421
chr1	160316985	160316990	ETS2	TRANSFAC	yes		160313062	3923	118383422
chr1	160317002	160317006	YY1	TRANSFAC	yes		160313062	3940	118383423
chr1	160317015	160317029	SPIC	JASPAR	yes		160313062	3953	118383424
chr1	160317028	160317032	NFE	TRANSFAC	yes		160313062	3966	118383425
chr1	160317031	160317051	TP53	JASPAR	yes		160313062	3969	118383426
chr1	160317048	160317053	SP1	TRANSFAC	yes		160313062	3986	118383427
chr1	160317055	160317065	HOXB13	JASPAR	yes		160313062	3993	118383428
chr1	160317055	160317065	HOXD13	JASPAR	yes		160313062	3993	118383429
chr1	160317055	160317066	HOXA10	JASPAR	yes		160313062	3993	118383430
chr1	160317056	160317066	ALX3	JASPAR	yes		160313062	3994	118383431
chr1	160317056	160317066	EMX2	JASPAR	yes		160313062	3994	118383432
chr1	160317056	160317066	ESX1	JASPAR	yes		160313062	3994	118383433
chr1	160317056	160317066	GBX2	JASPAR	yes		160313062	3994	118383434
chr1	160317056	160317066	GSX1	JASPAR	yes		160313062	3994	118383435
chr1	160317056	160317066	GSX2	JASPAR	yes		160313062	3994	118383436
chr1	160317056	160317066	HESX1	JASPAR	yes		160313062	3994	118383437
chr1	160317056	160317066	HOXB2	JASPAR	yes		160313062	3994	118383438
chr1	160317056	160317066	HOXB3	JASPAR	yes		160313062	3994	118383439
chr1	160317056	160317066	LBX2	JASPAR	yes		160313062	3994	118383440
chr1	160317056	160317066	LHX2	JASPAR	yes		160313062	3994	118383441
chr1	160317056	160317066	LHX6	JASPAR	yes		160313062	3994	118383442
chr1	160317056	160317066	MEOX1	JASPAR	yes		160313062	3994	118383443
chr1	160317056	160317066	MEOX2	JASPAR	yes		160313062	3994	118383444
chr1	160317056	160317066	MIXL1	JASPAR	yes		160313062	3994	118383445
chr1	160317056	160317066	MNX1	JASPAR	yes		160313062	3994	118383446
chr1	160317056	160317066	NOTO	JASPAR	yes		160313062	3994	118383447
chr1	160317056	160317066	POU6F1	JASPAR	yes		160313062	3994	118383448
chr1	160317056	160317066	RAX	JASPAR	yes		160313062	3994	118383449
chr1	160317057	160317065	BSX	JASPAR	yes		160313062	3995	118383450
chr1	160317057	160317065	DLX6	JASPAR	yes		160313062	3995	118383451
chr1	160317057	160317065	EN1	JASPAR	yes		160313062	3995	118383452
chr1	160317057	160317065	ISX	JASPAR	yes		160313062	3995	118383453
chr1	160317057	160317065	LBX1	JASPAR	yes		160313062	3995	118383454
chr1	160317057	160317065	LHX9	JASPAR	yes		160313062	3995	118383455
chr1	160317057	160317065	LMX1A	JASPAR	yes		160313062	3995	118383456
chr1	160317057	160317065	LMX1B	JASPAR	yes		160313062	3995	118383457
chr1	160317057	160317065	NKX6-1	JASPAR	yes		160313062	3995	118383458
chr1	160317057	160317065	NKX6-2	JASPAR	yes		160313062	3995	118383459
chr1	160317057	160317065	PAX4	JASPAR	yes		160313062	3995	118383460
chr1	160317057	160317065	PDX1	JASPAR	yes		160313062	3995	118383461
chr1	160317057	160317065	PRRX1	JASPAR	yes		160313062	3995	118383462
chr1	160317057	160317065	RAX2	JASPAR	yes		160313062	3995	118383463
chr1	160317057	160317065	SHOX	JASPAR	yes		160313062	3995	118383464
chr1	160317057	160317065	UNCX	JASPAR	yes		160313062	3995	118383465
chr1	160317057	160317065	VAX1	JASPAR	yes		160313062	3995	118383466
chr1	160317057	160317065	VAX2	JASPAR	yes		160313062	3995	118383467
chr1	160317057	160317065	VSX1	JASPAR	yes		160313062	3995	118383468
chr1	160317057	160317065	VSX2	JASPAR	yes		160313062	3995	118383469
chr1	160317059	160317067	HOXA5	JASPAR	yes		160313062	3997	118383470
chr1	160317071	160317074	MYB	TRANSFAC	yes		160313062	4009	118383471
chr1	160317091	160317106	IRF9	JASPAR	yes		160313062	4029	118383472

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id
chr1	160980948	rs12758348	C	A	652206	Breast	0.397034	669794
chr1	159727739	rs12029953	C	A	585323	Ovary	0.279311	661869
chr1	159883964	rs397790700	A	AT	429098	Uterus	0.199989	662578
chr1	161235954	rs139826170	C	T	907212	Liver	0.414338	670961

Genomic Location	chr1:160313062-160328742[+]
TSS	160313062
Gene Name	NCSTN
Ensembl ID	ENSG00000162736.11
ENTREZID	23385
Uniprot
	B4DR82
	Q92542
Protein Name
Protein Name	Nicastrin

EnhancerDB

Enhancers that regulate NCSTN[ENSG00000162736.11]

Transcript facotrs that regulate NCSTN[ENSG00000162736.11]

SNPs associated with NCSTN[ENSG00000162736.11], confirmed by eQTL

Details of NCSTN[ENSG00000162736.11]

Expression levels of NCSTN[ENSG00000162736.11]