EnhancerDB
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Enhancers that regulate SSR2[ENSG00000163479.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 155896988 155901060 enh89514 155990750 89690
Prostate (RWPE1)
chr1 155904830 155905033 vista3435 155990750 85717
VISTA
chr1 155906065 155916435 enh656 155990750 74315
Placenta Blood (Karpas-422) Lung (PC-9)
chr1 155916072 155916212 vista3436 155990750 74538
VISTA
chr1 155929638 155938855 enh94831 155990750 51895
Muscle (Myoblast) Blood (T-cell)
chr1 155942785 155947235 enh12293 155990750 43515
Placenta Uterus
chr1 155944562 155945214 vista3437 155990750 45536
VISTA
chr1 155945743 155946196 vista3438 155990750 44554
VISTA
chr1 155946363 155946660 vista3439 155990750 44090
VISTA
chr1 155951073 155951535 vista3440 155990750 39215
VISTA
chr1 155967865 155975455 enh79219 155990750 15295
Prostate (PC-3) Brain (SK-N-MC) Liver (HepG2)
chr1 155976385 155980955 enh103107 155990750 9795
Peripheral Blood (MM.1S)
chr1 156017996 156022478 enh102386 155990750 27246
Bone (Osteoblast)
chr1 156059426 156062550 vista103 155990750 68676
VISTA
chr1 156063928 156076316 enh12294 155990750 73178
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 156065479 156069043 vista104 155990750 74729
VISTA
chr1 156066868 156067143 vista3441 155990750 76118
VISTA
chr1 156067665 156067930 vista3442 155990750 76915
VISTA
chr1 156072303 156076849 vista105 155990750 81553
VISTA
chr1 156072500 156072641 vista3443 155990750 81750
VISTA
chr1 156073142 156073699 vista3444 155990750 82392
VISTA
chr1 156073854 156074351 vista3445 155990750 83104
VISTA
chr1 156074715 156075305 vista3446 155990750 83965
VISTA
chr1 156080085 156084335 enh27147 155990750 89335
Astrocyte Stomach
chr1 156086105 156099215 enh12295 155990750 95355
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Heart
chr1 156089405 156089622 vista3447 155990750 98655
VISTA
Transcript facotrs that regulate SSR2[ENSG00000163479.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SSR2[ENSG00000163479.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 155771471 rs2988999 T A,C 207368 Esophagus 0.301046 645729
chr1 156636370 rs74118729 G A 645620 Esophagus 0.271951 650259
chr1 156659450 rs140477301 T C 668700 Heart 0.387134 650485
chr1 156654990 rs7555224 G A 664240 Heart 0.335679 650437
chr1 156061222 rs7542186 G C 70472 Liver 0.119994 646746
chr1 156686402 rs12141324 A G,T 695652 Lung 0.136197 650803
chr1 156600901 rs6662946 A G 610151 Stomach 0.19401 650046
Details of SSR2[ENSG00000163479.9]
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Genomic Location chr1:155978839-155990750[-]
TSS 155990750
Gene Name SSR2
Ensembl ID ENSG00000163479.9
ENTREZID 6746
Uniprot
B4DUJ9
P43308
Protein Name
Translocon-associated protein subunit beta
Expression levels of SSR2[ENSG00000163479.9]
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