EnhancerDB
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Enhancers that regulate SGMS2[ENSG00000164023.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 108652630 108664695 enh71359 108745719 81024
Liver (HepG2) Brain (SK-N-SH) Muscle (A673) Peripheral Blood (MM.1S) Uterus Pancreas Neural Stem Cells (H9) Stomach
chr4 108667365 108675075 enh21726 108745719 70644
Placenta Liver (HepG2)
chr4 108675225 108681351 enh71360 108745719 64368
Peripheral Blood (MM.1S) Neural Stem Cells (H9) Brain (SK-N-MC)
chr4 108713385 108717535 enh54906 108745719 28184
Large Intestine
chr4 108719345 108725095 enh54907 108745719 20624
Prostate (PC-3) Large Intestine
chr4 108727705 108733735 enh54908 108745719 11984
Peripheral Blood (MM.1S) Large Intestine Stomach
chr4 108752245 108761739 enh21727 108745719 6526
Esophagus Placenta Stomach
chr4 108758517 108758852 vista45596 108745719 12798
VISTA
chr4 108760061 108760236 vista45597 108745719 14342
VISTA
chr4 108764249 108769099 enh63346 108745719 18530
Esophagus Brain (SK-N-MC)
chr4 108772200 108779199 enh36906 108745719 26481
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Colon (HCT116) Muscle (Myoblast) Uterus Stomach
chr4 108781675 108790815 enh21728 108745719 35956
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Heart
chr4 108783895 108784172 vista45598 108745719 38176
VISTA
chr4 108795365 108800795 enh97523 108745719 49646
Stomach Epithelial (MCF-7)
chr4 108810083 108814233 enh71361 108745719 64364
Neural Stem Cells (H9)
chr4 108814784 108820016 enh86555 108745719 69065
Colon (HCT116)
chr4 108819119 108819373 vista45599 108745719 73400
VISTA
chr4 108821168 108821439 vista45600 108745719 75449
VISTA
chr4 108835485 108840915 enh48858 108745719 89766
Thymus
chr4 108841245 108845895 enh83266 108745719 95526
Prostate (PC-3)
Transcript facotrs that regulate SGMS2[ENSG00000164023.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SGMS2[ENSG00000164023.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 108746990 rs10021742 C T 0 Esophagus 0.253991 7736743
chr4 108498840 rs2726687 C T 246879 Esophagus 0.273499 7735447
chr4 109664667 rs7663958 A C 828464 Uterus 0.202749 7741250
chr4 109115883 rs1503251 C A 279680 Lung 0.274876 7738679
Details of SGMS2[ENSG00000164023.10]
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Genomic Location chr4:108745719-108836203[+]
TSS 108745719
Gene Name SGMS2
Ensembl ID ENSG00000164023.10
ENTREZID 166929
Uniprot
Q8NHU3
A0A024RDH4
Protein Name
Phosphatidylcholine:ceramide cholinephosphotransferase 2
Expression levels of SGMS2[ENSG00000164023.10]
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