EnhancerDB
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Enhancers that regulate GHDC[ENSG00000167925.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 40266825 40270975 enh4411 40346531 75556
Blood (Karpas-422)
chr17 40282305 40288075 enh88293 40346531 58456
Pancreas Thyroid Uterus Stomach
chr17 40292394 40297395 enh32194 40346531 49136
Epithelial (MCF-7) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Pancreas Muscle (Myotube) Heart
chr17 40377585 40381735 enh4412 40346531 31054
Blood (Karpas-422)
chr17 40385005 40389155 enh4413 40346531 38474
Blood (Karpas-422)
chr17 40390345 40414201 enh4414 40346531 43814
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
chr17 40400517 40401003 vista24812 40346531 53986
VISTA
chr17 40416965 40426735 enh4415 40346531 70434
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Stomach Placenta Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Epithelial (MCF-7)
chr17 40418689 40419364 vista24813 40346531 72158
VISTA
chr17 40438296 40438586 vista24814 40346531 91765
VISTA
chr17 40442498 40442595 vista24815 40346531 95967
VISTA
Transcript facotrs that regulate GHDC[ENSG00000167925.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GHDC[ENSG00000167925.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 40400932 rs114408613 T C 54401 Esophagus 0.218068 4877018
chr17 41306260 rs12942870 C T 959729 Ovary 0.397463 4881683
chr17 40396208 rs112185999 T C 49677 Uterus 0.168726 4876965
chr17 39819315 rs8073284 C T 521502 Liver 0.25973 4874288
chr17 40335424 rs57014673 TTGCC T 5393 Stomach 0.436649 4876786
Details of GHDC[ENSG00000167925.11]
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Genomic Location chr17:40340817-40346531[-]
TSS 40346531
Gene Name GHDC
Ensembl ID ENSG00000167925.11
ENTREZID 84514
Uniprot
A0A024R1Y7
Q8N2G8
Protein Name
GH3 domain-containing protein
Expression levels of GHDC[ENSG00000167925.11]
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