EnhancerDB
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Enhancers that regulate KRT78[ENSG00000170423.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 53144325 53150155 enh75040 53242876 92721
Muscle (A673)
chr12 53196085 53200235 enh75041 53242876 42641
Muscle (A673)
chr12 53219045 53223195 enh14732 53242876 19681
Placenta
chr12 53229080 53229305 vista13485 53242876 13571
VISTA
chr12 53229830 53230092 vista13486 53242876 12784
VISTA
chr12 53249369 53285465 enh14733 53242876 6493
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 53253974 53254173 vista13487 53242876 11098
VISTA
chr12 53261473 53261693 vista13488 53242876 18597
VISTA
chr12 53264136 53264576 vista13489 53242876 21260
VISTA
chr12 53265042 53265518 vista13490 53242876 22166
VISTA
chr12 53266551 53266796 vista13491 53242876 23675
VISTA
chr12 53266859 53267080 vista13492 53242876 23983
VISTA
chr12 53267781 53268340 vista13493 53242876 24905
VISTA
chr12 53270322 53270511 vista13494 53242876 27446
VISTA
chr12 53273269 53273433 vista13495 53242876 30393
VISTA
chr12 53281915 53282052 vista13496 53242876 39039
VISTA
chr12 53284889 53285178 vista13497 53242876 42013
VISTA
chr12 53287185 53291335 enh109553 53242876 44309
Stomach
chr12 53288883 53289427 vista13498 53242876 46007
VISTA
chr12 53295205 53311695 enh14734 53242876 52329
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Placenta Peripheral Blood (MM.1S) Uterus Pancreas Neural Stem Cells (H9) Stomach
chr12 53301815 53302147 vista13499 53242876 58939
VISTA
chr12 53312254 53312405 vista13500 53242876 69378
VISTA
chr12 53312825 53320035 enh14735 53242876 69949
Liver (HepG2) Cervix (HeLa-S3) Astrocyte Placenta Colon (HCT116) Epithelial (MCF-7)
chr12 53318665 53319069 vista13501 53242876 75789
VISTA
chr12 53333105 53340015 enh14736 53242876 90229
Cervix (HeLa-S3) Brain (SK-N-MC) Muscle (A673) Placenta Stomach
chr12 53336677 53336830 vista13502 53242876 93801
VISTA
chr12 53338460 53338676 vista13503 53242876 95584
VISTA
chr12 53339346 53339557 vista13504 53242876 96470
VISTA
chr12 53340686 53341032 vista13505 53242876 97810
VISTA
Transcript facotrs that regulate KRT78[ENSG00000170423.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with KRT78[ENSG00000170423.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 53760710 rs10876446 G C 517834 Esophagus 0.172884 2645907
chr12 53541230 rs111203894 A G 298354 Esophagus 0.0864151 2644894
chr12 53276900 rs73108453 A G 34024 Pancreas 0.219911 2642742
chr12 53256863 rs58017462 G A 13987 Breast 0.224671 2642365
chr12 53036251 rs141367266 G A 195337 Ovary 0.640941 2640565
chr12 53796046 rs186959418 C A,T 553170 Uterus 0.510683 2646218
chr12 52568501 rs12424533 C T 663087 Thyroid 0.104269 2636362
chr12 53333791 rs79078147 A G 90915 Lung 0.133887 2643382
chr12 52699829 rs61915661 C T 531759 Stomach 0.337099 2637978
Details of KRT78[ENSG00000170423.8]
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Genomic Location chr12:53231588-53242876[-]
TSS 53242876
Gene Name KRT78
Ensembl ID ENSG00000170423.8
ENTREZID 196374
Uniprot
Q8N1N4
Protein Name
type II cytoskeletal 78
Keratin
Expression levels of KRT78[ENSG00000170423.8]
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