EnhancerDB
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Enhancers that regulate RAPH1[ENSG00000173166.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 204311629 204311925 vista34419 204400133 88208
VISTA
chr2 204313685 204318595 enh19125 204400133 81538
Astrocyte Placenta
chr2 204315265 204315638 vista34420 204400133 84495
VISTA
chr2 204347005 204352662 enh48401 204400133 47471
Spleen Peripheral Blood (MM.1S) Thymus Blood (OCI-LY7)
chr2 204360920 204368034 enh34161 204400133 32099
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Lung (PC-9) Epithelial (MCF-7)
chr2 204362935 204363240 vista34421 204400133 36893
VISTA
chr2 204373425 204380235 enh53521 204400133 19898
Large Intestine Stomach
chr2 204373438 204373815 vista34422 204400133 26318
VISTA
chr2 204393119 204393487 vista34423 204400133 6646
VISTA
chr2 204406825 204420175 enh19126 204400133 6692
Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Epithelial (MCF-7)
chr2 204424987 204429405 enh44972 204400133 24854
Muscle (A673) Muscle (Myotube)
chr2 204433605 204453715 enh6121 204400133 33472
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung
chr2 204448549 204448751 vista34424 204400133 48416
VISTA
chr2 204454433 204472275 enh34162 204400133 54300
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Lung (PC-9)
chr2 204475105 204479255 enh53522 204400133 74972
Large Intestine
chr2 204484985 204498035 enh19127 204400133 84852
Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr2 204499475 204499823 vista34425 204400133 99342
VISTA
chr2 204499885 204504714 enh60904 204400133 99752
Brain (SK-N-MC) Blood (OCI-LY7) Muscle (A673) Neural Stem Cells (H9) Heart
Transcript facotrs that regulate RAPH1[ENSG00000173166.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RAPH1[ENSG00000173166.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 203897940 rs188023457 G T 361128 Esophagus 0.303232 6300052
chr2 204775030 rs76676160 T C,G 374897 Esophagus 0.045783 6303884
chr2 205318079 rs13419430 G A,C 917946 Breast 0.403438 6306834
chr2 203437199 rs182239554 G A,C 821869 Ovary 0.953246 6298849
chr2 205371753 rs58205620 A G 971620 Liver 0.481286 6307184
chr2 204881865 rs10199454 C T 481732 Lung 0.251625 6304337
Details of RAPH1[ENSG00000173166.13]
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Genomic Location chr2:204259068-204400133[-]
TSS 204400133
Gene Name RAPH1
Ensembl ID ENSG00000173166.13
ENTREZID 65059
Uniprot
C9K0J5
Q70E73
Protein Name
Ras association
Ras-associated and pleckstrin homology domains-containing protein 1
Expression levels of RAPH1[ENSG00000173166.13]
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