EnhancerDB
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Enhancers that regulate KRT28[ENSG00000173908.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 38875245 38880855 enh57707 38956211 75356
Pancreas Prostate (PC-3) Stomach Lung (A549)
chr17 38881265 38886435 enh108666 38956211 69776
Cervix (HeLa-S3) Lung (PC-9)
chr17 38888365 38893519 enh62616 38956211 62692
Esophagus Cervix (HeLa-S3)
chr17 38957965 38969075 enh32190 38956211 1754
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Lung (PC-9) Epithelial (MCF-7)
chr17 38995625 38999775 enh112500 38956211 39414
Brain (SK-N-MC)
chr17 39001145 39015955 enh17144 38956211 44934
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 39003172 39003257 vista24757 38956211 46961
VISTA
chr17 39010500 39010808 vista24758 38956211 54289
VISTA
chr17 39012522 39012675 vista24759 38956211 56311
VISTA
chr17 39055145 39077753 enh17145 38956211 98934
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript facotrs that regulate KRT28[ENSG00000173908.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 38958563 38959185 ZNF274 GTRD no Cervix (HeLa-S3) 38956211 2352 21756874
chr17 38958718 38959556 ZNF274 GTRD no Cervix (HeLa-S3) 38956211 2507 21756875
chr17 38959752 38960082 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3541 21756876
chr17 38959754 38960138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3543 21756877
chr17 38959756 38960272 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3545 21756878
chr17 38959763 38960159 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3552 21756879
chr17 38959802 38960122 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3591 21756880
chr17 38959829 38960093 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3618 21756881
chr17 38959863 38960076 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3652 21756882
chr17 38959866 38960060 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 38956211 3655 21756883
chr17 38959882 38960022 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3671 21756884
chr17 38959883 38960079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 38956211 3672 21756885
SNPs associated with KRT28[ENSG00000173908.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of KRT28[ENSG00000173908.8]
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Genomic Location chr17:38948455-38956211[-]
TSS 38956211
Gene Name KRT28
Ensembl ID ENSG00000173908.8
ENTREZID 162605
Uniprot
Q7Z3Y7
Protein Name
type I cytoskeletal 28
Keratin
Expression levels of KRT28[ENSG00000173908.8]
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