EnhancerDB
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Enhancers that regulate PTP4A2[ENSG00000184007.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 32306525 32316915 enh58086 32410457 93542
Skin (Keratinocyte) Prostate (RWPE1) Bone (Osteoblast) Stomach Peripheral Blood (MM.1S) Pancreas Blood (T-cell) Epithelial (MCF-7)
chr1 32314121 32314597 vista1092 32410457 95860
VISTA
chr1 32318785 32323408 enh42925 32410457 87049
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Bone (Osteoblast) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
chr1 32333785 32349455 enh202 32410457 61002
Liver (HepG2) Large Intestine Blood (T-cell) Blood (OCI-LY7) Stomach Thyroid Blood (Karpas-422) Pancreas Thymus Epithelial (MCF-7)
chr1 32347360 32347436 vista1093 32410457 63021
VISTA
chr1 32350585 32359268 enh203 32410457 51189
Large Intestine Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Blood (Karpas-422) Blood (T-cell)
chr1 32354934 32355150 vista1094 32410457 55307
VISTA
chr1 32360725 32365515 enh204 32410457 44942
Prostate (RWPE1) Prostate (PC-3) Cervix (HeLa-S3) Blood (Karpas-422)
chr1 32365536 32372655 enh205 32410457 37802
Blood (OCI-LY7) Cervix (HeLa-S3) Thymus Blood (Karpas-422)
chr1 32384725 32402935 enh11722 32410457 7522
Bone Marrow (K562) Cervix (HeLa-S3) Muscle (A673) Placenta Lung (PC-9) Pancreas Uterus Blood (T-cell)
chr1 32405536 32405898 vista1095 32410457 4559
VISTA
chr1 32415585 32431955 enh11723 32410457 5128
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 32420307 32420572 vista1096 32410457 9850
VISTA
chr1 32421622 32422096 vista1097 32410457 11165
VISTA
chr1 32423598 32423720 vista1098 32410457 13141
VISTA
chr1 32439972 32455205 enh42926 32410457 29515
Skin (Keratinocyte) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Lung Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Breast Spleen Muscle (Myotube) Uterus Thymus Stomach
chr1 32465359 32473836 enh60108 32410457 54902
Peripheral Blood (MM.1S) Neural Stem Cells (H9) Blood (OCI-LY7)
chr1 32482780 32491015 enh60109 32410457 72323
Bone Marrow (K562) Colon (HCT116) Blood (OCI-LY7)
chr1 32510030 32510913 vista22 32410457 99573
VISTA
Transcript facotrs that regulate PTP4A2[ENSG00000184007.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 32405174 32405750 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 32410457 4707 107802750
chr1 32405548 32405562 JUN JASPAR yes 32410457 4895 118267594
chr1 32405550 32405561 BATF JASPAR yes 32410457 4896 118267595
chr1 32405551 32405562 FOSL2 JASPAR yes 32410457 4895 118267596
chr1 32405551 32405562 JUNB JASPAR yes 32410457 4895 118267597
chr1 32405552 32405563 FOS JASPAR yes 32410457 4894 118267598
chr1 32405552 32405563 FOSL1 JASPAR yes 32410457 4894 118267599
chr1 32405552 32405563 JUND JASPAR yes 32410457 4894 118267600
chr1 32405552 32405563 NFE2 JASPAR yes 32410457 4894 118267601
chr1 32405553 32405562 JDP2 JASPAR yes 32410457 4895 118267602
chr1 32405553 32405564 FOSL2 JASPAR yes 32410457 4893 118267603
chr1 32405553 32405564 JUNB JASPAR yes 32410457 4893 118267604
chr1 32405553 32405564 NFE2L2 JASPAR yes 32410457 4893 118267605
chr1 32405553 32405567 JUN JASPAR yes 32410457 4890 118267606
chr1 32405568 32405583 RUNX2 JASPAR yes 32410457 4874 118267607
chr1 32405574 32405589 HNF4G JASPAR yes 32410457 4868 118267608
chr1 32405575 32405590 HNF4A JASPAR yes 32410457 4867 118267609
chr1 32405585 32405596 SPDEF JASPAR yes 32410457 4861 118267610
chr1 32405587 32405594 PEA3 TRANSFAC yes 32410457 4863 118267611
chr1 32405593 32405612 CTCF JASPAR yes 32410457 4845 118267612
chr1 32405595 32405614 CTCF JASPAR yes 32410457 4843 118267613
chr1 32405600 32405610 FIGLA JASPAR yes 32410457 4847 118267614
chr1 32405600 32405611 USF2 JASPAR yes 32410457 4846 118267615
chr1 32405605 32405619 PLAG1 JASPAR yes 32410457 4838 118267616
chr1 32405608 32405623 ZIC3 JASPAR yes 32410457 4834 118267617
chr1 32405608 32405623 ZIC4 JASPAR yes 32410457 4834 118267618
chr1 32405609 32405623 ZIC1 JASPAR yes 32410457 4834 118267619
chr1 32405613 32405623 MZF1 JASPAR yes 32410457 4834 118267620
chr1 32405628 32405632 LFA1 TRANSFAC yes 32410457 4825 118267621
chr1 32405720 32405735 AR JASPAR yes 32410457 4722 118267622
chr1 32405746 32405750 NFE TRANSFAC yes 32410457 4707 118267623
chr1 32405746 32405759 SMAD2 JASPAR yes 32410457 4698 118267624
chr1 32405751 32405762 TFAP2A JASPAR yes 32410457 4695 118267625
chr1 32405767 32405771 YY1 TRANSFAC yes 32410457 4686 118267626
chr1 32405773 32405784 ELK4 JASPAR yes 32410457 4673 118267627
chr1 32405773 32405784 FLI1 JASPAR yes 32410457 4673 118267628
chr1 32405773 32405786 ELF3 JASPAR yes 32410457 4671 118267629
chr1 32405774 32405784 ETV6 JASPAR yes 32410457 4673 118267630
chr1 32405774 32405785 ELF5 JASPAR yes 32410457 4672 118267631
chr1 32405774 32405786 EHF JASPAR yes 32410457 4671 118267632
chr1 32405774 32405786 ELF1 JASPAR yes 32410457 4671 118267633
chr1 32405774 32405786 ELF4 JASPAR yes 32410457 4671 118267634
chr1 32405774 32405787 ELF1 JASPAR yes 32410457 4670 118267635
chr1 32405774 32405789 STAT1 JASPAR yes 32410457 4668 118267636
chr1 32405775 32405782 SPI1 JASPAR yes 32410457 4675 118267637
chr1 32405775 32405783 EHF JASPAR yes 32410457 4674 118267638
chr1 32405775 32405783 FEV JASPAR yes 32410457 4674 118267639
chr1 32405776 32405787 STAT1 JASPAR yes 32410457 4670 118267640
chr1 32405776 32405787 STAT3 JASPAR yes 32410457 4670 118267641
chr1 32405781 32405789 FOXO3 JASPAR yes 32410457 4668 118267642
chr1 32405846 32405860 ONECUT1 JASPAR yes 32410457 4597 118267643
chr1 32405846 32405860 ONECUT2 JASPAR yes 32410457 4597 118267644
chr1 32405846 32405860 ONECUT3 JASPAR yes 32410457 4597 118267645
chr1 32405847 32405857 CUX2 JASPAR yes 32410457 4600 118267646
chr1 32405856 32405862 ETS1 JASPAR yes 32410457 4595 118267647
chr1 32405856 32405862 SPI1 JASPAR yes 32410457 4595 118267648
chr1 32405867 32405878 CEBPA JASPAR yes 32410457 4579 118267649
chr1 32405878 32405889 CEBPA JASPAR yes 32410457 4568 118267650
chr1 32405879 32405889 CEBPB JASPAR yes 32410457 4568 118267651
chr1 32405879 32405889 CEBPD JASPAR yes 32410457 4568 118267652
chr1 32405879 32405889 CEBPE JASPAR yes 32410457 4568 118267653
chr1 32405879 32405889 CEBPG JASPAR yes 32410457 4568 118267654
chr1 32405879 32405890 CEBPB JASPAR yes 32410457 4567 118267655
SNPs associated with PTP4A2[ENSG00000184007.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 31581492 rs117636585 C T 790530 Esophagus 0.205519 209101
chr1 32419044 rs9792944 C T 8587 Esophagus 0.0588706 216048
chr1 31638554 rs35789676 G A 733468 Ovary 0.187014 210070
chr1 32248058 rs59066420 T C 123964 Uterus 0.300665 214686
chr1 32803648 rs77365103 C T 393191 Thyroid 0.198573 217943
chr1 31607655 rs148973245 C T 764367 Liver 0.0028923 209479
chr1 32307201 rs78705054 C T 64821 Lung 0.0969757 214991
Details of PTP4A2[ENSG00000184007.13]
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Genomic Location chr1:32372022-32410457[-]
TSS 32410457
Gene Name PTP4A2
Ensembl ID ENSG00000184007.13
ENTREZID 8073
Uniprot
Q12974
Protein Name
Protein tyrosine phosphatase type IVA 2
Expression levels of PTP4A2[ENSG00000184007.13]
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