EnhancerDB
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Enhancers that regulate A3GALT2[ENSG00000184389.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 33682385 33690299 enh11732 33786699 96400
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Placenta Colon (HCT116) Lung (PC-9) Heart
chr1 33692744 33705455 enh11733 33786699 81244
Liver (HepG2) Prostate (RWPE1) Blood (GM12878) Muscle (A673) Placenta Lung (PC-9) Heart
chr1 33706425 33712935 enh11734 33786699 73764
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Placenta Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 33716636 33716974 vista1152 33786699 69725
VISTA
chr1 33722494 33723960 vista23 33786699 62739
VISTA
chr1 33724185 33729262 enh47159 33786699 57437
Bone (Osteoblast) Thymus
chr1 33731145 33735359 enh220 33786699 51340
Esophagus Prostate (RWPE1) Blood (Karpas-422)
chr1 33747865 33752015 enh74182 33786699 34684
Muscle (A673)
chr1 33753173 33757323 enh64018 33786699 29376
Heart
chr1 33759039 33763545 enh89478 33786699 23154
Uterus Prostate (RWPE1)
chr1 33797825 33814983 enh221 33786699 11126
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Bone (Osteoblast) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 33802277 33802571 vista1153 33786699 15578
VISTA
chr1 33804092 33804324 vista1154 33786699 17393
VISTA
chr1 33804359 33804743 vista1155 33786699 17660
VISTA
chr1 33823605 33832715 enh11735 33786699 36906
Kidney Brain (SK-N-MC) Large Intestine Ovary Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr1 33828789 33830947 vista24 33786699 42090
VISTA
chr1 33829513 33829825 vista1156 33786699 42814
VISTA
chr1 33840740 33857476 enh26617 33786699 54041
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Colon (HCT116) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
chr1 33860305 33868235 enh64019 33786699 73606
Bone Marrow (K562) Muscle (A673) Colon (HCT116) Heart
chr1 33873656 33878355 enh26618 33786699 86957
Prostate (PC-3) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Heart Epithelial (MCF-7)
chr1 33880060 33884380 enh85949 33786699 93361
Colon (HCT116)
chr1 33884753 33892495 enh26619 33786699 98054
Astrocyte Prostate (PC-3) Bone (Osteoblast) Muscle (A673)
Transcript facotrs that regulate A3GALT2[ENSG00000184389.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with A3GALT2[ENSG00000184389.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 33906146 rs10914717 G A,C 119447 Breast 1.71662e-10 224168
chr1 33906146 rs10914717 G A,C 119447 Spleen 9.88024e-06 224168
chr1 33907926 rs1570687 A T 121227 Ovary 5.06443e-05 224195
Details of A3GALT2[ENSG00000184389.8]
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Genomic Location chr1:33772367-33786699[-]
TSS 33786699
Gene Name A3GALT2
Ensembl ID ENSG00000184389.8
ENTREZID 127550
Uniprot
U3KPV4
Protein Name
Alpha-1,3-galactosyltransferase 2
Expression levels of A3GALT2[ENSG00000184389.8]
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