EnhancerDB
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Enhancers that regulate CLCNKB[ENSG00000184908.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 16272606 16295457 enh83 16370272 74815
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
chr1 16276028 16276482 vista505 16370272 93790
VISTA
chr1 16277350 16278224 vista506 16370272 92048
VISTA
chr1 16291784 16292062 vista507 16370272 78210
VISTA
chr1 16292565 16293101 vista508 16370272 77171
VISTA
chr1 16310225 16314375 enh78964 16370272 55897
Prostate (PC-3)
chr1 16335305 16339455 enh11543 16370272 30817
Placenta
chr1 16339360 16339596 vista509 16370272 30676
VISTA
chr1 16339773 16339933 vista510 16370272 30339
VISTA
chr1 16342592 16343008 vista511 16370272 27264
VISTA
chr1 16364376 16364458 vista512 16370272 5814
VISTA
chr1 16366462 16366839 vista513 16370272 3433
VISTA
chr1 16366857 16367156 vista514 16370272 3116
VISTA
chr1 16389145 16397135 enh49668 16370272 18873
Liver (HepG2) Large Intestine Esophagus Stomach Pancreas Heart
chr1 16399845 16411190 enh49669 16370272 29573
Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Heart Stomach
chr1 16401814 16401932 vista515 16370272 31542
VISTA
chr1 16413464 16423075 enh26555 16370272 43192
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Breast Pancreas Heart
chr1 16434153 16452566 enh26556 16370272 63881
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr1 16438237 16438733 vista516 16370272 67965
VISTA
chr1 16439002 16439355 vista517 16370272 68730
VISTA
chr1 16442572 16442804 vista518 16370272 72300
VISTA
chr1 16463477 16472609 enh11544 16370272 93205
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr1 16470181 16470602 vista519 16370272 99909
VISTA
Transcript facotrs that regulate CLCNKB[ENSG00000184908.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 16363918 16366133 ZNF274 GTRD no Bone Marrow (K562) 16370272 4139 107802213
chr1 16365977 16366471 ZNF143 GTRD no Epithelial (MCF-7) 16370272 3801 107802214
chr1 16366240 16368164 ZBTB33 GTRD no Brain (SK-N-SH) 16370272 2108 107802215
chr1 16366465 16366470 TFAP2A TRANSFAC yes 16370272 3802 118238272
chr1 16366465 16366471 MZF1 JASPAR yes 16370272 3801 118238273
chr1 16366489 16366495 NFIC JASPAR yes 16370272 3777 118238274
chr1 16366508 16366520 TAL1 JASPAR yes 16370272 3752 118238275
chr1 16366510 16366522 TAL1 JASPAR yes 16370272 3750 118238276
chr1 16366526 16366547 ZNF263 JASPAR yes 16370272 3725 118238277
chr1 16366568 16366587 CTCF JASPAR yes 16370272 3685 118238278
chr1 16366574 16366595 REST JASPAR yes 16370272 3677 118238279
chr1 16366577 16366583 YY1 JASPAR yes 16370272 3689 118238280
chr1 16366586 16366601 TFAP2A JASPAR yes 16370272 3671 118238281
chr1 16366586 16366601 TFAP2C JASPAR yes 16370272 3671 118238282
chr1 16366592 16366597 SP1 TRANSFAC yes 16370272 3675 118238283
chr1 16366592 16366606 PLAG1 JASPAR yes 16370272 3666 118238284
chr1 16366603 16366618 NR2C2 JASPAR yes 16370272 3654 118238285
chr1 16366607 16366612 SP1 TRANSFAC yes 16370272 3660 118238286
chr1 16366613 16366617 ESR1 TRANSFAC yes 16370272 3655 118238287
chr1 16366655 16366666 NFE2 JASPAR yes 16370272 3606 118238288
chr1 16366657 16366663 ESR1 TRANSFAC yes 16370272 3609 118238289
chr1 16366659 16366663 ESR1 TRANSFAC yes 16370272 3609 118238290
chr1 16366687 16366694 SPIB JASPAR yes 16370272 3578 118238291
chr1 16366687 16366708 ZNF263 JASPAR yes 16370272 3564 118238292
chr1 16366697 16366702 SP1 TRANSFAC yes 16370272 3570 118238293
chr1 16366700 16366714 PLAG1 JASPAR yes 16370272 3558 118238294
chr1 16366702 16366706 LFA1 TRANSFAC yes 16370272 3566 118238295
chr1 16366719 16366740 ZNF263 JASPAR yes 16370272 3532 118238296
chr1 16366730 16366739 SNAI2 JASPAR yes 16370272 3533 118238297
chr1 16366730 16366740 ID4 JASPAR yes 16370272 3532 118238298
chr1 16366730 16366740 TCF3 JASPAR yes 16370272 3532 118238299
chr1 16366730 16366740 TCF4 JASPAR yes 16370272 3532 118238300
chr1 16366778 16366782 YY1 TRANSFAC yes 16370272 3490 118238301
chr1 16366780 16366791 STAT3 JASPAR yes 16370272 3481 118238302
chr1 16366782 16366794 NHLH1 JASPAR yes 16370272 3478 118238303
chr1 16366783 16366793 TFAP4 JASPAR yes 16370272 3479 118238304
chr1 16366783 16366795 TAL1 JASPAR yes 16370272 3477 118238305
chr1 16366809 16366812 MYB TRANSFAC yes 16370272 3460 118238306
chr1 16366810 16366828 TP73 JASPAR yes 16370272 3444 118238307
chr1 16366811 16366831 TP53 JASPAR yes 16370272 3441 118238308
chr1 16366827 16366837 GABPA JASPAR yes 16370272 3435 118238309
chr1 16366830 16366837 SPIB JASPAR yes 16370272 3435 118238310
chr1 16366883 16366895 POU3F1 JASPAR yes 16370272 3377 118238311
chr1 16366883 16366895 POU3F2 JASPAR yes 16370272 3377 118238312
chr1 16366885 16366897 TEF JASPAR yes 16370272 3375 118238313
chr1 16366887 16366890 MYB TRANSFAC yes 16370272 3382 118238314
chr1 16366892 16366895 MYB TRANSFAC yes 16370272 3377 118238315
chr1 16366953 16366963 POU6F2 JASPAR yes 16370272 3309 118238316
chr1 16366954 16366964 EVX1 JASPAR yes 16370272 3308 118238317
chr1 16366954 16366964 HOXA2 JASPAR yes 16370272 3308 118238318
chr1 16366954 16366964 MEOX1 JASPAR yes 16370272 3308 118238319
chr1 16366954 16366964 MEOX2 JASPAR yes 16370272 3308 118238320
chr1 16366954 16366964 MNX1 JASPAR yes 16370272 3308 118238321
chr1 16366956 16366967 PHOX2A JASPAR yes 16370272 3305 118238322
chr1 16366956 16366967 PROP1 JASPAR yes 16370272 3305 118238323
chr1 16366957 16366972 JUND JASPAR yes 16370272 3300 118238324
chr1 16366966 16366973 POU2F1 TRANSFAC yes 16370272 3299 118238325
chr1 16366978 16366993 RUNX2 JASPAR yes 16370272 3279 118238326
chr1 16366987 16367002 TFAP2C JASPAR yes 16370272 3270 118238327
chr1 16366999 16367005 SP1 TRANSFAC yes 16370272 3267 118238328
chr1 16367000 16367005 SP1 TRANSFAC yes 16370272 3267 118238329
chr1 16367003 16367009 ETS1 JASPAR yes 16370272 3263 118238330
chr1 16367025 16367030 SP1 TRANSFAC yes 16370272 3242 118238331
chr1 16367032 16367045 NR2F1 JASPAR yes 16370272 3227 118238332
chr1 16367034 16367045 ESRRA JASPAR yes 16370272 3227 118238333
chr1 16367034 16367045 ESRRB JASPAR yes 16370272 3227 118238334
chr1 16367046 16367058 PKNOX1 JASPAR yes 16370272 3214 118238335
chr1 16367046 16367058 TGIF1 JASPAR yes 16370272 3214 118238336
chr1 16367046 16367058 TGIF2 JASPAR yes 16370272 3214 118238337
chr1 16367061 16367065 NFE TRANSFAC yes 16370272 3207 118238338
chr1 16367061 16367066 GATA1 TRANSFAC yes 16370272 3206 118238339
chr1 16367061 16367067 GATA3 JASPAR yes 16370272 3205 118238340
chr1 16367062 16367072 SMAD3 JASPAR yes 16370272 3200 118238341
chr1 16367077 16367092 FOXP1 JASPAR yes 16370272 3180 118238342
chr1 16367078 16367093 FOXP1 JASPAR yes 16370272 3179 118238343
chr1 16367078 16367099 IRF1 JASPAR yes 16370272 3173 118238344
chr1 16367106 16367126 RREB1 JASPAR yes 16370272 3146 118238345
chr1 16367131 16367137 TCF4 TRANSFAC yes 16370272 3135 118238346
chr1 16367132 16367146 MTF1 JASPAR yes 16370272 3126 118238347
chr1 16367135 16367156 ZNF263 JASPAR yes 16370272 3116 118238348
chr1 16367136 16367146 SREBF1 JASPAR yes 16370272 3126 118238349
SNPs associated with CLCNKB[ENSG00000184908.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 16367722 rs12137681 G C 2550 Esophagus 0.00911091 109420
chr1 16368133 rs6696416 A G 2139 Heart 0.00396174 109425
chr1 16368778 rs6604905 C A 1494 Ovary 0.000187825 109438
chr1 16369387 rs3884148 G A 885 Lung 1.85831e-09 109450
Details of CLCNKB[ENSG00000184908.13]
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Genomic Location chr1:16370272-16383803[+]
TSS 16370272
Gene Name CLCNKB
Ensembl ID ENSG00000184908.13
ENTREZID 1188
Uniprot
P51801
A8K8H0
Protein Name
CLCNKB protein
Chloride channel protein ClC-Kb
Expression levels of CLCNKB[ENSG00000184908.13]
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