EnhancerDB
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Enhancers that regulate TLCD2[ENSG00000185561.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 1499092 1514135 enh16927 1613732 99597
Liver (HepG2) Prostate (RWPE1) Bone (Osteoblast) Stomach Placenta Thyroid Heart Epithelial (MCF-7)
chr17 1519125 1530695 enh4199 1613732 83037
Placenta Liver (HepG2) Blood (Karpas-422)
chr17 1521068 1521369 vista23665 1613732 92363
VISTA
chr17 1523946 1524301 vista23666 1613732 89431
VISTA
chr17 1533068 1533815 vista23667 1613732 79917
VISTA
chr17 1568485 1575159 enh32045 1613732 38573
Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Thyroid Pancreas Uterus Heart
chr17 1585953 1586309 vista23668 1613732 27423
VISTA
chr17 1620806 1621089 vista23669 1613732 7074
VISTA
chr17 1621105 1630375 enh4200 1613732 7373
Liver (HepG2) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Stomach
chr17 1625487 1625593 vista23670 1613732 11755
VISTA
chr17 1626372 1626653 vista23671 1613732 12640
VISTA
chr17 1648445 1652595 enh109740 1613732 34713
Stomach
chr17 1666519 1666783 vista23672 1613732 52787
VISTA
chr17 1666985 1672355 enh109741 1613732 53253
Stomach
chr17 1667462 1668045 vista23673 1613732 53730
VISTA
chr17 1680879 1690071 enh16928 1613732 67147
Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Placenta Muscle (Myotube) Uterus Heart
chr17 1691305 1702895 enh4201 1613732 77573
Bone Marrow (K562) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Muscle (A673) Blood (Karpas-422) Uterus Thymus Heart
chr17 1710045 1714195 enh52401 1613732 96313
Large Intestine
Transcript facotrs that regulate TLCD2[ENSG00000185561.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 1617757 1621453 POLR2A UCSC Txn Factor no Conserved 1613732 4025 108228951
SNPs associated with TLCD2[ENSG00000185561.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 1198136 rs149724222 C T 412928 Esophagus 0.291629 4692382
chr17 1733331 rs17291745 C G,T 119599 Esophagus 0.172531 4696790
chr17 1617608 rs6502892 T C 3876 Esophagus 2.37157e-06 4695909
chr17 1877754 rs34176755 C G 264022 Heart 0.057987 4697825
chr17 2293420 rs2447095 A G 679688 Spleen 0.259561 4701536
chr17 2612584 rs734957 G A,C 998852 Ovary 0.0118719 4703512
chr17 1625215 rs11652502 T C 11483 Liver 0.141698 4696012
chr17 1613128 rs548581223 AGC A 0 Lung 0.263965 4695870
chr17 816535 rs374458117 CAG C 794529 Stomach 0.136765 4686915
chr17 1479208 rs113276644 C T 131856 Adrenal 0.0281934 4694765
Details of TLCD2[ENSG00000185561.8]
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Genomic Location chr17:1611064-1613732[-]
TSS 1613732
Gene Name TLCD2
Ensembl ID ENSG00000185561.8
ENTREZID 727910
Uniprot
A6NGC4
Protein Name
TLC domain-containing protein 2
Expression levels of TLCD2[ENSG00000185561.8]
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