EnhancerDB
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Enhancers that regulate SRGAP3[ENSG00000196220.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 9312165 9316315 enh82421 9404737 88422
Prostate (PC-3)
chr3 9316565 9324855 enh35176 9404737 79882
Prostate (PC-3) Astrocyte Muscle (Myotube) Neural Stem Cells (H9)
chr3 9332865 9337015 enh82422 9404737 67722
Prostate (PC-3)
chr3 9341455 9346662 enh54006 9404737 58075
Skin (Keratinocyte) Large Intestine
chr3 9344109 9344331 vista39896 9404737 60406
VISTA
chr3 9350805 9361035 enh20312 9404737 43702
Brain (SK-N-SH) Large Intestine Astrocyte Placenta Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr3 9379205 9386635 enh20313 9404737 18102
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr3 9386845 9398579 enh20314 9404737 6158
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Lung (PC-9) Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr3 9422978 9423353 vista39897 9404737 18241
VISTA
chr3 9436025 9464855 enh6987 9404737 31288
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Blood (T-cell) Heart
chr3 9452001 9452408 vista39898 9404737 47264
VISTA
Transcript facotrs that regulate SRGAP3[ENSG00000196220.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SRGAP3[ENSG00000196220.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 9189622 rs2543495 C G 0 Esophagus 0.000744933 6538399
chr3 9404650 rs73126664 C A,G 0 Esophagus 3.65603e-19 6539916
chr3 9404650 rs73126664 C A,G 0 Esophagus 4.36311e-31 6539916
chr3 9640467 rs7634268 A G 235730 Breast 0.0266879 6540394
chr3 9062554 rs74905766 T C 0 Thyroid 0.0101724 6537835
chr3 9441180 rs62246275 A T 36443 Lung 0.0010011 6540004
chr3 9441542 rs73115804 G T 36805 Adrenal 0.204694 6540010
Details of SRGAP3[ENSG00000196220.11]
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Genomic Location chr3:9022275-9404737[-]
TSS 9404737
Gene Name SRGAP3
Ensembl ID ENSG00000196220.11
ENTREZID 9901
Uniprot
O43295
Protein Name
SLIT-ROBO Rho GTPase-activating protein 3
SRGAP3 protein
Expression levels of SRGAP3[ENSG00000196220.11]
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