EnhancerDB
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Enhancers that regulate SZT2[ENSG00000198198.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 43756905 43761175 enh108319 43855553 94378
Cervix (HeLa-S3) Lung (PC-9)
chr1 43760174 43760222 vista1402 43855553 95331
VISTA
chr1 43761236 43761355 vista1403 43855553 94198
VISTA
chr1 43793885 43798268 enh26658 43855553 57285
Bone Marrow (K562) Cervix (HeLa-S3) Esophagus Astrocyte Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Spleen Neural Stem Cells (H9) Heart
chr1 43804365 43813135 enh61831 43855553 42418
Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Esophagus Heart
chr1 43815718 43816062 vista1404 43855553 39491
VISTA
chr1 43839359 43839523 vista1405 43855553 16030
VISTA
chr1 43845305 43849455 enh11810 43855553 6098
Placenta
chr1 43884019 43884040 vista1406 43855553 28466
VISTA
chr1 43901568 43901739 vista1407 43855553 46015
VISTA
chr1 43924725 43950195 enh11811 43855553 69172
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Stomach
Transcript facotrs that regulate SZT2[ENSG00000198198.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SZT2[ENSG00000198198.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 43839949 rs397861131 TA T 15604 Esophagus 0.000610616 272645
chr1 43489176 rs841421 G A 366377 Esophagus 0.127262 270490
chr1 43855626 rs146927083 G C 0 Heart 0.0633823 272713
chr1 43414200 rs710221 G A 441353 Heart 0.31594 269461
chr1 44249078 rs78468330 A G 330757 Pancreas 0.230233 275028
chr1 43855626 rs146927083 G C 0 Breast 0.125335 272713
chr1 44251337 rs151282189 GC G 333016 Spleen 0.234807 275056
chr1 44117721 rs115064132 G A 199400 Uterus 0.802608 274187
chr1 44491905 rs72683987 C G,T 573584 Lung 0.185431 276281
chr1 43451338 rs2367162 T C 404215 Stomach 0.303854 269983
Details of SZT2[ENSG00000198198.9]
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Genomic Location chr1:43855553-43918321[+]
TSS 43855553
Gene Name SZT2
Ensembl ID ENSG00000198198.9
ENTREZID 23334
Uniprot
Q5T011
Protein Name
KICSTOR complex protein SZT2
Protein SZT2
Expression levels of SZT2[ENSG00000198198.9]
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