EnhancerDB
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Enhancers that regulate HIST2H3A[ENSG00000203852.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 149816287 149817606 vista3237 149824181 6575
VISTA
chr1 149820361 149820952 vista3238 149824181 3229
VISTA
chr1 149821015 149821647 vista3239 149824181 2534
VISTA
chr1 149849205 149853375 enh47235 149824181 25024
Thymus Blood (T-cell)
chr1 149853331 149853687 vista3240 149824181 29150
VISTA
chr1 149888481 149888615 vista3241 149824181 64300
VISTA
chr1 149910900 149911536 vista3242 149824181 86719
VISTA
Transcript facotrs that regulate HIST2H3A[ENSG00000203852.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 149820058 149820534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3647 107827339
chr1 149820289 149820865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3316 107827340
chr1 149820303 149820823 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 3358 107827341
chr1 149820356 149820812 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3369 107827342
chr1 149820393 149820399 HiNF-A TRANSFAC yes 149824181 3782 118365744
chr1 149820394 149820404 TFEC JASPAR yes 149824181 3777 118365745
chr1 149820398 149820409 FOS JASPAR yes 149824181 3772 118365746
chr1 149820399 149820408 JDP2 JASPAR yes 149824181 3773 118365747
chr1 149820400 149820406 JUN TRANSFAC yes 149824181 3775 118365748
chr1 149820401 149820412 CDX2 JASPAR yes 149824181 3769 118365749
chr1 149820402 149820413 HOXA10 JASPAR yes 149824181 3768 118365750
chr1 149820403 149820412 CDX1 JASPAR yes 149824181 3769 118365751
chr1 149820410 149820420 SMAD3 JASPAR yes 149824181 3761 118365752
chr1 149820421 149820428 NKX3-1 JASPAR yes 149824181 3753 118365753
chr1 149820450 149820464 MTF1 JASPAR yes 149824181 3717 118365754
chr1 149820455 149820469 RXRB JASPAR yes 149824181 3712 118365755
chr1 149820455 149820470 HNF4A JASPAR yes 149824181 3711 118365756
chr1 149820457 149820833 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3348 107827343
chr1 149820530 149820534 NFE TRANSFAC yes 149824181 3647 118365757
chr1 149820530 149820537 MEIS1 JASPAR yes 149824181 3644 118365758
chr1 149820544 149820549 GATA2 JASPAR yes 149824181 3632 118365759
chr1 149820545 149820551 ZNF354C JASPAR yes 149824181 3630 118365760
chr1 149820546 149820556 NKX2-3 JASPAR yes 149824181 3625 118365761
chr1 149820547 149820556 NKX2-8 JASPAR yes 149824181 3625 118365762
chr1 149820583 149820597 NR2F1 JASPAR yes 149824181 3584 118365763
chr1 149820616 149821072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3109 107827344
chr1 149820616 149821072 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3109 107827345
chr1 149820634 149820638 NFE TRANSFAC yes 149824181 3543 118365764
chr1 149820635 149820640 GATA2 JASPAR yes 149824181 3541 118365765
chr1 149820651 149820662 FOXA1 JASPAR yes 149824181 3519 118365766
chr1 149820651 149820666 FOXA1 JASPAR yes 149824181 3515 118365767
chr1 149820660 149820665 MYC TRANSFAC yes 149824181 3516 118365768
chr1 149820690 149821066 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3115 107827346
chr1 149820690 149821066 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 3115 107827347
chr1 149820709 149820724 RFX5 JASPAR yes 149824181 3457 118365769
chr1 149820717 149820725 TBX5 JASPAR yes 149824181 3456 118365770
chr1 149820731 149821347 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 2834 107827348
chr1 149820731 149821347 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 2834 107827349
chr1 149820739 149820753 GATA2 JASPAR yes 149824181 3428 118365771
chr1 149820741 149820749 GATA3 JASPAR yes 149824181 3432 118365772
chr1 149820752 149820762 MYF6 JASPAR yes 149824181 3419 118365773
chr1 149820752 149820762 NEUROG2 JASPAR yes 149824181 3419 118365774
chr1 149820754 149820758 YY1 TRANSFAC yes 149824181 3423 118365775
chr1 149820756 149820771 STAT2 JASPAR yes 149824181 3410 118365776
chr1 149820758 149820766 FOXO3 JASPAR yes 149824181 3415 118365777
chr1 149820758 149820768 NFATC3 JASPAR yes 149824181 3413 118365778
chr1 149820764 149820768 YY1 TRANSFAC yes 149824181 3413 118365779
chr1 149820791 149820795 YY1 TRANSFAC yes 149824181 3386 118365780
chr1 149820795 149820800 GATA2 JASPAR yes 149824181 3381 118365781
chr1 149820804 149820817 EOMES JASPAR yes 149824181 3364 118365782
chr1 149820806 149820816 TBR1 JASPAR yes 149824181 3365 118365783
chr1 149820806 149820817 TBX20 JASPAR yes 149824181 3364 118365784
chr1 149820806 149820817 TBX2 JASPAR yes 149824181 3364 118365785
chr1 149820807 149820817 TBX21 JASPAR yes 149824181 3364 118365786
chr1 149820808 149820816 MGA JASPAR yes 149824181 3365 118365787
chr1 149820808 149820816 TBX15 JASPAR yes 149824181 3365 118365788
chr1 149820808 149820816 TBX1 JASPAR yes 149824181 3365 118365789
chr1 149820808 149820816 TBX4 JASPAR yes 149824181 3365 118365790
chr1 149820808 149820816 TBX5 JASPAR yes 149824181 3365 118365791
chr1 149820811 149820825 POU1F1 JASPAR yes 149824181 3356 118365792
chr1 149820812 149820824 POU3F1 JASPAR yes 149824181 3357 118365793
chr1 149820812 149820824 POU3F2 JASPAR yes 149824181 3357 118365794
chr1 149820812 149820825 POU3F3 JASPAR yes 149824181 3356 118365795
chr1 149820813 149820825 POU2F1 JASPAR yes 149824181 3356 118365796
chr1 149820814 149820823 POU3F4 JASPAR yes 149824181 3358 118365797
chr1 149820814 149820823 POU5F1B JASPAR yes 149824181 3358 118365798
chr1 149820832 149820848 ZNF143 JASPAR yes 149824181 3333 118365799
chr1 149820845 149820848 MYB TRANSFAC yes 149824181 3333 118365800
chr1 149820854 149820870 ZNF143 JASPAR yes 149824181 3311 118365801
chr1 149820865 149820874 NF-kappaB TRANSFAC yes 149824181 3307 118365802
chr1 149820865 149820875 NFKB1 JASPAR yes 149824181 3306 118365803
chr1 149820865 149820875 REL JASPAR yes 149824181 3306 118365804
chr1 149820865 149820876 NFKB1 JASPAR yes 149824181 3305 118365805
chr1 149820865 149820886 IRF1 JASPAR yes 149824181 3295 118365806
chr1 149820866 149820879 POU2F2 JASPAR yes 149824181 3302 118365807
chr1 149820867 149820882 PRDM1 JASPAR yes 149824181 3299 118365808
chr1 149820869 149820881 IRF1 JASPAR yes 149824181 3300 118365809
chr1 149820869 149820883 IRF7 JASPAR yes 149824181 3298 118365810
chr1 149820869 149820884 IRF9 JASPAR yes 149824181 3297 118365811
chr1 149820871 149820886 MEF2C JASPAR yes 149824181 3295 118365812
chr1 149820872 149820884 MEF2D JASPAR yes 149824181 3297 118365813
chr1 149820874 149820878 YY1 TRANSFAC yes 149824181 3303 118365814
chr1 149820883 149820886 MYB TRANSFAC yes 149824181 3295 118365815
chr1 149820890 149820908 MAFF JASPAR yes 149824181 3273 118365816
chr1 149820892 149820903 NRL JASPAR yes 149824181 3278 118365817
chr1 149820892 149820907 MAFK JASPAR yes 149824181 3274 118365818
chr1 149820892 149821092 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 3089 107827350
chr1 149820892 149821092 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 3089 107827351
chr1 149820941 149821073 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 149824181 3108 107827352
chr1 149820941 149821073 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 149824181 3108 107827353
chr1 149820951 149821321 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 149824181 2860 107827354
chr1 149820951 149821321 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 149824181 2860 107827355
chr1 149821030 149821034 TEAD2 TRANSFAC yes 149824181 3147 118365819
chr1 149821035 149821039 YY1 TRANSFAC yes 149824181 3142 118365820
chr1 149821037 149821048 RUNX1 JASPAR yes 149824181 3133 118365821
chr1 149821044 149821054 GSX1 JASPAR yes 149824181 3127 118365822
chr1 149821044 149821054 GSX2 JASPAR yes 149824181 3127 118365823
chr1 149821044 149821054 HOXA2 JASPAR yes 149824181 3127 118365824
chr1 149821044 149821054 MEOX1 JASPAR yes 149824181 3127 118365825
chr1 149821044 149821054 NOTO JASPAR yes 149824181 3127 118365826
chr1 149821045 149821053 NKX6-1 JASPAR yes 149824181 3128 118365827
chr1 149821045 149821053 NKX6-2 JASPAR yes 149824181 3128 118365828
chr1 149821045 149821055 POU6F2 JASPAR yes 149824181 3126 118365829
chr1 149821062 149821078 SOX4 JASPAR yes 149824181 3103 118365830
chr1 149821063 149821078 SOX21 JASPAR yes 149824181 3103 118365831
chr1 149821066 149821616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 2565 107827356
chr1 149821082 149821097 FOXP1 JASPAR yes 149824181 3084 118365832
chr1 149821085 149821096 FOXP2 JASPAR yes 149824181 3085 118365833
chr1 149821087 149821096 SRY JASPAR yes 149824181 3085 118365834
chr1 149821092 149821105 DUXA JASPAR yes 149824181 3076 118365835
chr1 149821093 149821104 DUX4 JASPAR yes 149824181 3077 118365836
chr1 149821117 149821129 ZBTB7B JASPAR yes 149824181 3052 118365837
chr1 149821117 149821129 ZBTB7C JASPAR yes 149824181 3052 118365838
chr1 149821123 149821127 H4TF2 TRANSFAC yes 149824181 3054 118365839
chr1 149821130 149821149 REST JASPAR yes 149824181 3032 118365840
chr1 149821171 149821175 YY1 TRANSFAC yes 149824181 3006 118365841
chr1 149821173 149821179 TCF4 TRANSFAC yes 149824181 3002 118365842
chr1 149821174 149821189 RFX5 JASPAR yes 149824181 2992 118365843
chr1 149821186 149821642 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 149824181 2539 107827357
chr1 149821205 149821223 NR3C1 JASPAR yes 149824181 2958 118365844
chr1 149821205 149821515 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 149824181 2666 107827358
chr1 149821217 149821223 ETS1 JASPAR yes 149824181 2958 118365845
chr1 149821228 149821231 MYB TRANSFAC yes 149824181 2950 118365846
chr1 149821235 149821240 TFAP2A TRANSFAC yes 149824181 2941 118365847
chr1 149821235 149821241 MZF1 JASPAR yes 149824181 2940 118365848
chr1 149821246 149821256 BARHL2 JASPAR yes 149824181 2925 118365849
chr1 149821248 149821252 YY1 TRANSFAC yes 149824181 2929 118365850
chr1 149821269 149821633 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 149824181 2548 107827359
chr1 149821276 149821281 GATA1 TRANSFAC yes 149824181 2900 118365851
chr1 149821298 149821310 MYBL1 JASPAR yes 149824181 2871 118365852
chr1 149821302 149821495 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 2686 107827360
chr1 149821312 149821315 MYB TRANSFAC yes 149824181 2866 118365853
chr1 149821324 149821700 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 2481 107827361
chr1 149821353 149821358 ETS2 TRANSFAC yes 149824181 2823 118365854
chr1 149821353 149821363 TEAD4 JASPAR yes 149824181 2818 118365855
chr1 149821354 149821365 NFKB1 JASPAR yes 149824181 2816 118365856
chr1 149821378 149821398 TBX19 JASPAR yes 149824181 2783 118365857
chr1 149821380 149821390 MAX JASPAR yes 149824181 2791 118365858
chr1 149821380 149821392 HES5 JASPAR yes 149824181 2789 118365859
chr1 149821380 149821392 HES7 JASPAR yes 149824181 2789 118365860
chr1 149821381 149821391 BHLHE40 JASPAR yes 149824181 2790 118365861
chr1 149821381 149821391 BHLHE41 JASPAR yes 149824181 2790 118365862
chr1 149821381 149821391 CLOCK JASPAR yes 149824181 2790 118365863
chr1 149821381 149821391 HEY1 JASPAR yes 149824181 2790 118365864
chr1 149821381 149821391 HEY2 JASPAR yes 149824181 2790 118365865
chr1 149821381 149821391 MAX JASPAR yes 149824181 2790 118365866
chr1 149821381 149821391 MLXIPL JASPAR yes 149824181 2790 118365867
chr1 149821381 149821391 MLX JASPAR yes 149824181 2790 118365868
chr1 149821381 149821391 MNT JASPAR yes 149824181 2790 118365869
chr1 149821381 149821391 TFE3 JASPAR yes 149824181 2790 118365870
chr1 149821381 149821391 TFEB JASPAR yes 149824181 2790 118365871
chr1 149821381 149821391 TFEC JASPAR yes 149824181 2790 118365872
chr1 149821382 149821392 MAX JASPAR yes 149824181 2789 118365873
chr1 149821383 149821388 MYC TRANSFAC yes 149824181 2793 118365874
chr1 149821383 149821388 USF1 TRANSFAC yes 149824181 2793 118365875
chr1 149821383 149821388 USF2 TRANSFAC yes 149824181 2793 118365876
chr1 149821392 149821408 NFYA JASPAR yes 149824181 2773 118365877
chr1 149821397 149821401 H1TF2 TRANSFAC yes 149824181 2780 118365878
chr1 149821397 149821401 NFE TRANSFAC yes 149824181 2780 118365879
chr1 149821397 149821401 SRF TRANSFAC yes 149824181 2780 118365880
chr1 149821404 149821408 TEAD2 TRANSFAC yes 149824181 2773 118365881
chr1 149821404 149821409 TBP TRANSFAC yes 149824181 2772 118365882
chr1 149821404 149821410 TFIID TRANSFAC yes 149824181 2771 118365883
chr1 149821427 149821439 SRF JASPAR yes 149824181 2742 118365884
chr1 149821434 149821438 TEAD2 TRANSFAC yes 149824181 2743 118365885
chr1 149821434 149821439 TBP TRANSFAC yes 149824181 2742 118365886
chr1 149821434 149821440 TFIID TRANSFAC yes 149824181 2741 118365887
chr1 149821446 149821813 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 2368 107827362
chr1 149821450 149821468 SRF JASPAR yes 149824181 2713 118365888
chr1 149821451 149821465 TCF7L2 JASPAR yes 149824181 2716 118365889
chr1 149821457 149821472 FOXA1 JASPAR yes 149824181 2709 118365890
chr1 149821458 149821465 NKX3-1 JASPAR yes 149824181 2716 118365891
chr1 149821458 149821814 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 2367 107827363
chr1 149821485 149821489 YY1 TRANSFAC yes 149824181 2692 118365892
chr1 149821502 149821506 YY1 TRANSFAC yes 149824181 2675 118365893
chr1 149821513 149821771 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 149824181 2410 107827364
chr1 149821530 149821536 LEF1 TRANSFAC yes 149824181 2645 118365894
chr1 149821530 149821536 SOX10 JASPAR yes 149824181 2645 118365895
chr1 149821552 149821563 NFIL3 JASPAR yes 149824181 2618 118365896
chr1 149821553 149821565 HLF JASPAR yes 149824181 2616 118365897
chr1 149821575 149821578 MYB TRANSFAC yes 149824181 2603 118365898
chr1 149821584 149821736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 149824181 2445 107827365
chr1 149821591 149821602 ETV2 JASPAR yes 149824181 2579 118365899
chr1 149821592 149821602 ETS1 JASPAR yes 149824181 2579 118365900
chr1 149821592 149821603 FLI1 JASPAR yes 149824181 2578 118365901
chr1 149821595 149821604 SRY JASPAR yes 149824181 2577 118365902
chr1 149821609 149821613 LFA1 TRANSFAC yes 149824181 2568 118365903
chr1 149821625 149821633 GMEB2 JASPAR yes 149824181 2548 118365904
chr1 149821626 149821638 CREB1 JASPAR yes 149824181 2543 118365905
chr1 149821628 149821638 HMBOX1 JASPAR yes 149824181 2543 118365906
chr1 149821630 149821633 MYB TRANSFAC yes 149824181 2548 118365907
SNPs associated with HIST2H3A[ENSG00000203852.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of HIST2H3A[ENSG00000203852.3]
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Genomic Location chr1:149824181-149825836[+]
TSS 149824181
Gene Name HIST2H3A
Ensembl ID ENSG00000203852.3
ENTREZID 333932
Uniprot
Q71DI3
Protein Name
Histone H3.2
Expression levels of HIST2H3A[ENSG00000203852.3]
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