EnhancerDB

Enhancers that regulate LCAT[ENSG00000213398.3]

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Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears	More
chr16	67874105	67879135	enh4097	67978034	98899	Blood (Karpas-422)
chr16	67887034	67897232	enh4098	67978034	80802	Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
chr16	67891676	67892114	vista22797	67978034	85920	VISTA
chr16	67892470	67892795	vista22798	67978034	85239	VISTA
chr16	67895003	67895199	vista22799	67978034	82835	VISTA
chr16	67928285	67933479	enh31888	67978034	44555	Liver (HepG2) Epithelial (MCF-7) Esophagus Astrocyte Bone (Osteoblast) Stomach Pancreas Heart
chr16	67947093	67960855	enh4099	67978034	17179	Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Thyroid Blood (Karpas-422) Heart
chr16	67993555	67993691	vista22800	67978034	15521	VISTA
chr16	68029500	68029744	vista22801	67978034	51466	VISTA
chr16	68039646	68040046	vista22802	67978034	61612	VISTA
chr16	68041191	68045547	enh44313	67978034	63157	Muscle (Myotube)
chr16	68049692	68049950	vista22803	67978034	71658	VISTA
chr16	68050486	68054546	enh86217	67978034	72452	Colon (HCT116)
chr16	68061980	68068338	enh31889	67978034	83946	Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Lung (PC-9)
chr16	68071805	68077335	enh16740	67978034	93771	Esophagus Placenta Blood (T-cell) Stomach

Transcript facotrs that regulate LCAT[ENSG00000213398.3]

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Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id	More

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id	More
chr16	67751693	rs56029322	C	CGATA	221960	Heart	0.0319161	4497678
chr16	67833171	rs9928531	T	C	140482	Heart	0.00688353	4497958
chr16	67461429	rs921982	G	C	512224	Spleen	0.279536	4496218
chr16	68822927	rs200346241	AAAAG	A	844893	Ovary	0.259492	4502940
chr16	68054317	rs201746241	A	AT	76283	Liver	0.2073	4498832
chr16	68485090	rs8046110	T	C	507056	Lung	0.237985	4500630

Genomic Location	chr16:67973653-67978034[-]
TSS	67978034
Gene Name	LCAT
Ensembl ID	ENSG00000213398.3
ENTREZID	3931
Uniprot
	P04180
	A0A140VK24
Protein Name
	Lecithin-cholesterol acyltransferase
	Phosphatidylcholine-sterol acyltransferase