EnhancerDB
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Enhancers that regulate LYRM9[ENSG00000232859.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 26130565 26141335 enh17066 26221778 80443
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Peripheral Blood (MM.1S) Pancreas Blood (T-cell) Heart
chr17 26135195 26135302 vista24278 26221778 86476
VISTA
chr17 26137338 26137696 vista24279 26221778 84082
VISTA
chr17 26142869 26148055 enh62600 26221778 73723
Esophagus Stomach Blood (GM12878)
chr17 26144775 26144977 vista24280 26221778 76801
VISTA
chr17 26169845 26175670 enh52449 26221778 46108
Blood (T-cell) Large Intestine
chr17 26186085 26191275 enh52450 26221778 30503
Liver Large Intestine
chr17 26197885 26203115 enh17067 26221778 18663
Breast Placenta Cervix (HeLa-S3) Epithelial (MCF-7)
chr17 26212045 26218395 enh17068 26221778 3383
Thyroid Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 26214261 26214593 vista24281 26221778 7185
VISTA
chr17 26216019 26216352 vista24282 26221778 5426
VISTA
chr17 26233385 26237535 enh91143 26221778 11607
Bone Marrow (K562)
chr17 26244005 26249862 enh65031 26221778 22227
Cervix (HeLa-S3) Ovary Heart
chr17 26255145 26259295 enh110889 26221778 33367
Cervix (HeLa-S3)
chr17 26264905 26269795 enh52451 26221778 43127
Pancreas Peripheral Blood (MM.1S) Large Intestine
chr17 26277984 26278379 vista24283 26221778 56206
VISTA
chr17 26282205 26318497 enh4306 26221778 60427
Bone Marrow (K562) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Muscle (A673) Thyroid Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Heart
chr17 26307415 26307616 vista24284 26221778 85637
VISTA
chr17 26311866 26312151 vista24285 26221778 90088
VISTA
chr17 26314662 26314933 vista24286 26221778 92884
VISTA
chr17 26321305 26326015 enh75884 26221778 99527
Muscle (A673)
Transcript facotrs that regulate LYRM9[ENSG00000232859.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 26216765 26216779 FOXF2 JASPAR yes 26221778 4999 53656636
chr17 26216765 26216780 FOXP1 JASPAR yes 26221778 4998 53656637
chr17 26216768 26216779 FOXP2 JASPAR yes 26221778 4999 53656638
chr17 26216768 26216785 RARA JASPAR yes 26221778 4993 53656639
chr17 26216770 26216778 FOXD1 JASPAR yes 26221778 5000 53656647
chr17 26216770 26216778 FOXG1 JASPAR yes 26221778 5000 53656648
chr17 26216770 26216778 FOXO3 JASPAR yes 26221778 5000 53656649
chr17 26216772 26216778 HiNF-A TRANSFAC yes 26221778 5000 53656650
chr17 26216776 26216791 FOXP1 JASPAR yes 26221778 4987 53656651
chr17 26216783 26216804 IRF1 JASPAR yes 26221778 4974 53656652
chr17 26216787 26216793 SOX10 JASPAR yes 26221778 4985 53656653
chr17 26216787 26216801 SPIC JASPAR yes 26221778 4977 53656654
chr17 26216787 26216802 PRDM1 JASPAR yes 26221778 4976 53656655
chr17 26216790 26216803 SMAD2 JASPAR yes 26221778 4975 53656656
chr17 26216803 26216806 MYB TRANSFAC yes 26221778 4972 53656657
chr17 26216804 26216820 SOX8 JASPAR yes 26221778 4958 53656658
chr17 26216857 26216867 FIGLA JASPAR yes 26221778 4911 53656659
chr17 26216857 26216867 ID4 JASPAR yes 26221778 4911 53656660
chr17 26216857 26216867 TCF3 JASPAR yes 26221778 4911 53656661
chr17 26216857 26216867 TCF4 JASPAR yes 26221778 4911 53656662
chr17 26216858 26216867 SNAI2 JASPAR yes 26221778 4911 53656663
chr17 26216859 26216864 USF2 TRANSFAC yes 26221778 4914 53656664
chr17 26216876 26216886 SP1 JASPAR yes 26221778 4892 53656665
chr17 26216885 26216897 ZBTB7A JASPAR yes 26221778 4881 53656666
chr17 26216924 26216938 RORA JASPAR yes 26221778 4840 53656667
chr17 26216931 26216946 HSF1 JASPAR yes 26221778 4832 53656668
chr17 26216940 26216946 TCF4 TRANSFAC yes 26221778 4832 53656669
chr17 26216949 26216955 YY1 JASPAR yes 26221778 4823 53656670
chr17 26216978 26216987 NFIX JASPAR yes 26221778 4791 53656671
chr17 26216978 26216988 NFIA JASPAR yes 26221778 4790 53656672
chr17 26216980 26216986 NFIC JASPAR yes 26221778 4792 53656673
chr17 26216993 26217007 TCF7L2 JASPAR yes 26221778 4771 53656674
chr17 26217002 26217017 JUND JASPAR yes 26221778 4761 53656675
chr17 26217003 26217016 JUN JASPAR yes 26221778 4762 53656676
chr17 26217004 26217011 JUN TRANSFAC yes 26221778 4767 53656677
chr17 26217010 26217014 YY1 TRANSFAC yes 26221778 4764 53656678
chr17 26217012 26217022 GSC2 JASPAR yes 26221778 4756 53656679
chr17 26217013 26217021 OTX1 JASPAR yes 26221778 4757 53656680
chr17 26217013 26217021 OTX2 JASPAR yes 26221778 4757 53656681
chr17 26217029 26217033 YY1 TRANSFAC yes 26221778 4745 53656682
chr17 26217046 26217050 YY1 TRANSFAC yes 26221778 4728 53656683
chr17 26217055 26217059 YY1 TRANSFAC yes 26221778 4719 53656684
chr17 26217062 26217075 JUN JASPAR yes 26221778 4703 53656685
chr17 26217063 26217078 STAT2 JASPAR yes 26221778 4700 53656686
chr17 26217076 26217090 PLAG1 JASPAR yes 26221778 4688 53656687
chr17 26217091 26217098 NKX3-1 JASPAR yes 26221778 4680 53656688
chr17 26217098 26217108 NFIA JASPAR yes 26221778 4670 53656689
chr17 26217100 26217106 NFIC JASPAR yes 26221778 4672 53656690
chr17 26217153 26217157 YY1 TRANSFAC yes 26221778 4621 53656691
chr17 26217171 26217185 GATA2 JASPAR yes 26221778 4593 53656692
chr17 26217175 26217183 GATA3 JASPAR yes 26221778 4595 53656693
chr17 26217175 26217183 GATA5 JASPAR yes 26221778 4595 53656694
chr17 26217207 26217218 FOSL2 JASPAR yes 26221778 4560 53656695
chr17 26217213 26217224 CDX2 JASPAR yes 26221778 4554 53656696
chr17 26217214 26217225 HOXA10 JASPAR yes 26221778 4553 53656697
chr17 26217214 26217225 HOXC11 JASPAR yes 26221778 4553 53656698
chr17 26217214 26217225 HOXC12 JASPAR yes 26221778 4553 53656699
chr17 26217214 26217225 HOXC13 JASPAR yes 26221778 4553 53656700
chr17 26217214 26217225 HOXD12 JASPAR yes 26221778 4553 53656701
chr17 26217215 26217224 CDX1 JASPAR yes 26221778 4554 53656702
chr17 26217215 26217225 HOXA13 JASPAR yes 26221778 4553 53656703
chr17 26217215 26217225 HOXB13 JASPAR yes 26221778 4553 53656704
chr17 26217215 26217225 HOXC10 JASPAR yes 26221778 4553 53656705
chr17 26217215 26217225 HOXD11 JASPAR yes 26221778 4553 53656706
chr17 26217215 26217225 HOXD13 JASPAR yes 26221778 4553 53656707
chr17 26217247 26217262 RUNX2 JASPAR yes 26221778 4516 53656708
chr17 26217253 26217259 SOX10 JASPAR yes 26221778 4519 53656709
chr17 26217258 26217274 SOX4 JASPAR yes 26221778 4504 53656710
chr17 26217268 26217285 PAX1 JASPAR yes 26221778 4493 53656711
chr17 26217268 26217285 PAX9 JASPAR yes 26221778 4493 53656712
chr17 26217271 26217288 PAX1 JASPAR yes 26221778 4490 53656713
chr17 26217271 26217288 PAX9 JASPAR yes 26221778 4490 53656714
chr17 26217272 26217286 PAX6 JASPAR yes 26221778 4492 53656715
chr17 26217292 26217301 NKX3-2 JASPAR yes 26221778 4477 53656716
chr17 26217292 26217308 SRF JASPAR yes 26221778 4470 53656717
chr17 26217298 26217302 TEAD2 TRANSFAC yes 26221778 4476 53656718
chr17 26217298 26217303 TBP TRANSFAC yes 26221778 4475 53656719
chr17 26217304 26217314 NKX2-3 JASPAR yes 26221778 4464 53656720
chr17 26217305 26217314 NKX2-8 JASPAR yes 26221778 4464 53656721
chr17 26217322 26217327 GATA2 JASPAR yes 26221778 4451 53656722
chr17 26217377 26217388 ESRRA JASPAR yes 26221778 4390 53656723
chr17 26217377 26217388 ESRRB JASPAR yes 26221778 4390 53656724
chr17 26217411 26217426 FOXP1 JASPAR yes 26221778 4352 53656725
chr17 26217411 26217432 IRF1 JASPAR yes 26221778 4346 53656726
chr17 26217412 26217422 NFATC3 JASPAR yes 26221778 4356 53656727
chr17 26217412 26217433 IRF1 JASPAR yes 26221778 4345 53656728
chr17 26217414 26217421 NFATC2 JASPAR yes 26221778 4357 53656729
chr17 26217418 26217439 IRF1 JASPAR yes 26221778 4339 53656730
chr17 26217421 26217435 ONECUT2 JASPAR yes 26221778 4343 53656731
chr17 26217421 26217435 ONECUT3 JASPAR yes 26221778 4343 53656732
chr17 26217422 26217436 TCF7L2 JASPAR yes 26221778 4342 53656733
chr17 26217422 26217437 LEF1 JASPAR yes 26221778 4341 53656734
chr17 26217428 26217449 IRF1 JASPAR yes 26221778 4329 53656735
chr17 26217432 26217447 PRDM1 JASPAR yes 26221778 4331 53656736
chr17 26217453 26217460 JUN TRANSFAC yes 26221778 4318 53656737
chr17 26217468 26217476 GATA3 JASPAR yes 26221778 4302 53656738
chr17 26217473 26217478 ETS2 TRANSFAC yes 26221778 4300 53656739
chr17 26217491 26217497 HiNF-A TRANSFAC yes 26221778 4281 53656740
chr17 26217500 26217503 MYB TRANSFAC yes 26221778 4275 53656741
chr17 26217505 26217511 SOX10 JASPAR yes 26221778 4267 53656742
chr17 26217545 26217566 IRF1 JASPAR yes 26221778 4212 53656743
chr17 26217547 26217557 MEF2A JASPAR yes 26221778 4221 53656744
chr17 26217549 26217563 SPIC JASPAR yes 26221778 4215 53656745
chr17 26217549 26217564 PRDM1 JASPAR yes 26221778 4214 53656746
chr17 26217549 26217564 STAT2 JASPAR yes 26221778 4214 53656747
chr17 26217551 26217566 FOXP1 JASPAR yes 26221778 4212 53656748
chr17 26217568 26217574 SOX10 JASPAR yes 26221778 4204 53656749
chr17 26217573 26217583 NFKB1 JASPAR yes 26221778 4195 53656750
chr17 26217573 26217583 RELA JASPAR yes 26221778 4195 53656751
chr17 26217573 26217583 REL JASPAR yes 26221778 4195 53656752
chr17 26217573 26217584 NFKB1 JASPAR yes 26221778 4194 53656753
chr17 26217574 26217583 NF-kappaB TRANSFAC yes 26221778 4195 53656754
chr17 26217574 26217589 HSF1 JASPAR yes 26221778 4189 53656755
chr17 26217575 26217588 HSF1 JASPAR yes 26221778 4190 53656756
chr17 26217576 26217587 ELF5 JASPAR yes 26221778 4191 53656757
chr17 26217576 26217591 STAT1 JASPAR yes 26221778 4187 53656758
chr17 26217577 26217585 FEV JASPAR yes 26221778 4193 53656759
chr17 26217578 26217589 STAT1 JASPAR yes 26221778 4189 53656760
chr17 26217578 26217589 STAT3 JASPAR yes 26221778 4189 53656761
chr17 26217590 26217604 GATA2 JASPAR yes 26221778 4174 53656762
chr17 26217604 26217617 ZBTB18 JASPAR yes 26221778 4161 53656763
chr17 26217606 26217618 TAL1 JASPAR yes 26221778 4160 53656764
chr17 26217636 26217640 YY1 TRANSFAC yes 26221778 4138 53656765
chr17 26217640 26217643 MYB TRANSFAC yes 26221778 4135 53656766
chr17 26217646 26217660 STAT1 JASPAR yes 26221778 4118 53656767
chr17 26217648 26217652 NFE TRANSFAC yes 26221778 4126 53656768
chr17 26217667 26217680 ZBED1 JASPAR yes 26221778 4098 53656769
chr17 26217682 26217697 MEF2C JASPAR yes 26221778 4081 53656770
chr17 26217683 26217698 MEF2A JASPAR yes 26221778 4080 53656771
chr17 26217684 26217696 MEF2A JASPAR yes 26221778 4082 53656772
chr17 26217684 26217696 MEF2B JASPAR yes 26221778 4082 53656773
chr17 26217684 26217696 MEF2D JASPAR yes 26221778 4082 53656774
chr17 26217685 26217695 MEF2A JASPAR yes 26221778 4083 53656775
chr17 26217690 26217704 E2F7 JASPAR yes 26221778 4074 53656776
chr17 26217691 26217700 NKX3-2 JASPAR yes 26221778 4078 53656777
chr17 26217705 26217717 HNF1B JASPAR yes 26221778 4061 53656778
chr17 26217710 26217725 MEF2C JASPAR yes 26221778 4053 53656779
chr17 26217714 26217720 TBP TRANSFAC yes 26221778 4058 53656780
chr17 26217747 26217750 MYB TRANSFAC yes 26221778 4028 53656781
chr17 26217800 26217812 YY1 JASPAR yes 26221778 3966 53656782
chr17 26217805 26217809 YY1 TRANSFAC yes 26221778 3969 53656783
chr17 26217807 26217823 POU4F2 JASPAR yes 26221778 3955 53656784
chr17 26217807 26217823 POU4F3 JASPAR yes 26221778 3955 53656785
chr17 26217809 26217823 POU4F1 JASPAR yes 26221778 3955 53656786
chr17 26217814 26217826 POU2F1 JASPAR yes 26221778 3952 53656787
chr17 26217816 26217825 POU3F4 JASPAR yes 26221778 3953 53656788
chr17 26217819 26217827 DLX6 JASPAR yes 26221778 3951 53656789
chr17 26217819 26217827 MSX1 JASPAR yes 26221778 3951 53656790
chr17 26217833 26217848 PRDM1 JASPAR yes 26221778 3930 53656791
chr17 26217863 26217878 STAT2 JASPAR yes 26221778 3900 53656792
chr17 26217864 26217878 STAT1 JASPAR yes 26221778 3900 53656793
chr17 26217865 26217877 IRF1 JASPAR yes 26221778 3901 53656794
chr17 26217871 26217882 E2F6 JASPAR yes 26221778 3896 53656795
chr17 26217875 26217895 RREB1 JASPAR yes 26221778 3883 53656796
chr17 26217876 26217886 ZNF740 JASPAR yes 26221778 3892 53656797
chr17 26217880 26217890 SP1 JASPAR yes 26221778 3888 53656798
chr17 26217895 26217907 YY1 JASPAR yes 26221778 3871 53656799
chr17 26217906 26217919 ZBTB18 JASPAR yes 26221778 3859 53656800
chr17 26217936 26217940 LFA1 TRANSFAC yes 26221778 3838 53656801
chr17 26217946 26217956 SP1 JASPAR yes 26221778 3822 53656802
chr17 26217992 26218002 SP1 JASPAR yes 26221778 3776 53656803
chr17 26217992 26218006 PLAG1 JASPAR yes 26221778 3772 53656804
chr17 26217993 26218014 ZNF263 JASPAR yes 26221778 3764 53656805
chr17 26217994 26218015 ZNF263 JASPAR yes 26221778 3763 53656806
chr17 26218000 26218006 SP1 TRANSFAC yes 26221778 3772 53656807
chr17 26218000 26218021 ZNF263 JASPAR yes 26221778 3757 53656808
chr17 26218001 26218022 ZNF263 JASPAR yes 26221778 3756 53656809
chr17 26218004 26218014 SP1 JASPAR yes 26221778 3764 53656810
chr17 26218005 26218015 SP1 JASPAR yes 26221778 3763 53656811
chr17 26218007 26218013 NFE2 TRANSFAC yes 26221778 3765 53656812
chr17 26218019 26218034 FOXA1 JASPAR yes 26221778 3744 53656813
chr17 26218023 26218033 NFIA JASPAR yes 26221778 3745 53656814
chr17 26218025 26218031 NFIC JASPAR yes 26221778 3747 53656815
chr17 26218029 26218033 YY1 TRANSFAC yes 26221778 3745 53656816
chr17 26218047 26218053 LEF1 TRANSFAC yes 26221778 3725 53656817
chr17 26218047 26218053 SOX10 JASPAR yes 26221778 3725 53656818
chr17 26218055 26218064 ZEB1 JASPAR yes 26221778 3714 53656819
chr17 26218067 26218077 NFKB1 JASPAR yes 26221778 3701 53656820
chr17 26218071 26218075 NFE TRANSFAC yes 26221778 3703 53656821
chr17 26218072 26218077 GATA2 JASPAR yes 26221778 3701 53656822
chr17 26218081 26218102 ZNF263 JASPAR yes 26221778 3676 53656823
chr17 26218091 26218095 NFE TRANSFAC yes 26221778 3683 53656824
chr17 26218091 26218104 SMAD2 JASPAR yes 26221778 3674 53656825
chr17 26218093 26218104 E2F6 JASPAR yes 26221778 3674 53656826
chr17 26218109 26218120 FOXH1 JASPAR yes 26221778 3658 53656827
chr17 26218110 26218114 H1TF2 TRANSFAC yes 26221778 3664 53656828
chr17 26218110 26218114 NFE TRANSFAC yes 26221778 3664 53656829
chr17 26218110 26218114 SRF TRANSFAC yes 26221778 3664 53656830
chr17 26218113 26218119 ZNF354C JASPAR yes 26221778 3659 53656831
chr17 26218113 26218123 MAX JASPAR yes 26221778 3655 53656832
chr17 26218135 26218152 BCL6B JASPAR yes 26221778 3626 53656833
chr17 26218136 26218151 STAT1 JASPAR yes 26221778 3627 53656834
chr17 26218137 26218144 SPI1 JASPAR yes 26221778 3634 53656835
chr17 26218147 26218162 AR JASPAR yes 26221778 3616 53656836
chr17 26218155 26218163 MEIS3 JASPAR yes 26221778 3615 53656837
chr17 26218156 26218160 NFE TRANSFAC yes 26221778 3618 53656838
chr17 26218164 26218174 SP1 JASPAR yes 26221778 3604 53656839
chr17 26218166 26218174 EHF JASPAR yes 26221778 3604 53656840
chr17 26218225 26218246 ZNF263 JASPAR yes 26221778 3532 53656841
chr17 26218238 26218248 MZF1 JASPAR yes 26221778 3530 53656842
chr17 26218238 26218259 ZNF263 JASPAR yes 26221778 3519 53656843
chr17 26218241 26218247 SP1 TRANSFAC yes 26221778 3531 53656844
chr17 26218241 26218255 ZIC1 JASPAR yes 26221778 3523 53656845
chr17 26218241 26218256 ZIC3 JASPAR yes 26221778 3522 53656846
chr17 26218250 26218254 NFE TRANSFAC yes 26221778 3524 53656847
chr17 26218254 26218275 ZNF263 JASPAR yes 26221778 3503 53656848
chr17 26218261 26218272 ELK4 JASPAR yes 26221778 3506 53656849
chr17 26218261 26218272 FLI1 JASPAR yes 26221778 3506 53656850
chr17 26218261 26218274 ELF3 JASPAR yes 26221778 3504 53656851
chr17 26218262 26218272 ERF JASPAR yes 26221778 3506 53656852
chr17 26218262 26218272 ETS1 JASPAR yes 26221778 3506 53656853
chr17 26218262 26218272 ETV6 JASPAR yes 26221778 3506 53656854
chr17 26218262 26218272 GABPA JASPAR yes 26221778 3506 53656855
chr17 26218262 26218273 ELF5 JASPAR yes 26221778 3505 53656856
chr17 26218262 26218274 EHF JASPAR yes 26221778 3504 53656857
chr17 26218262 26218274 ELF1 JASPAR yes 26221778 3504 53656858
chr17 26218262 26218274 ELF4 JASPAR yes 26221778 3504 53656859
chr17 26218262 26218275 ELF1 JASPAR yes 26221778 3503 53656860
chr17 26218262 26218276 SPI1 JASPAR yes 26221778 3502 53656861
chr17 26218263 26218270 SPI1 JASPAR yes 26221778 3508 53656862
chr17 26218263 26218271 EHF JASPAR yes 26221778 3507 53656863
chr17 26218263 26218271 FEV JASPAR yes 26221778 3507 53656864
chr17 26218271 26218275 YY1 TRANSFAC yes 26221778 3503 53656865
chr17 26218293 26218309 ZNF143 JASPAR yes 26221778 3469 53656866
chr17 26218336 26218340 NFE TRANSFAC yes 26221778 3438 53656867
chr17 26218338 26218348 FIGLA JASPAR yes 26221778 3430 53656868
chr17 26218340 26218345 USF2 TRANSFAC yes 26221778 3433 53656869
chr17 26218374 26218377 MYB TRANSFAC yes 26221778 3401 53656870
chr17 26218380 26218384 NFE TRANSFAC yes 26221778 3394 53656871
chr17 26218380 26218385 GATA1 TRANSFAC yes 26221778 3393 53656872
chr17 26218380 26218386 GATA3 JASPAR yes 26221778 3392 53656873
SNPs associated with LYRM9[ENSG00000232859.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 26216397 rs7220420 A G 0 Esophagus 1.03651e-09 4809921
chr17 26216397 rs7220420 A G 0 Esophagus 3.91155e-22 4809921
chr17 26216397 rs7220420 A G 0 Heart 7.48471e-10 4809921
chr17 26216397 rs7220420 A G 0 Spleen 5.01281e-05 4809921
chr17 26198381 rs4796172 A G 6959 Uterus 0.233404 4809833
Details of LYRM9[ENSG00000232859.5]
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Genomic Location chr17:26205340-26221778[-]
TSS 26221778
Gene Name LYRM9
Ensembl ID ENSG00000232859.5
ENTREZID 201229
Uniprot
A8MSI8
Protein Name
LYR motif-containing protein 9
Expression levels of LYRM9[ENSG00000232859.5]
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