EnhancerDB
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Enhancers that regulate HLA-DMB[ENSG00000242574.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 32819276 32819643 vista51615 32908847 89204
VISTA
chr6 32832785 32838235 enh9049 32908847 70612
Thymus Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (T-cell) Stomach
chr6 32834766 32835076 vista51616 32908847 73771
VISTA
chr6 32848662 32857055 enh46105 32908847 51792
Skin (Keratinocyte) Prostate (PC-3) Esophagus Bone (Osteoblast) Lung Thyroid Adrenal Pancreas Spleen Muscle (Myotube) Uterus Stomach
chr6 32859685 32865335 enh9050 32908847 43512
Uterus Bone (Osteoblast) Blood (Karpas-422)
chr6 32912229 32912629 vista51617 32908847 3382
VISTA
chr6 32913033 32913520 vista51618 32908847 4186
VISTA
chr6 32928085 32933855 enh9051 32908847 19238
Blood (Karpas-422)
chr6 32935965 32954946 enh9052 32908847 27118
Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Epithelial (MCF-7)
chr6 32952668 32952702 vista51619 32908847 43821
VISTA
chr6 32956037 32956271 vista51620 32908847 47190
VISTA
chr6 32982632 32982839 vista51621 32908847 73785
VISTA
chr6 32983845 32989555 enh9053 32908847 74998
Large Intestine Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Pancreas Uterus Thymus Heart
chr6 32984432 32984503 vista51622 32908847 75585
VISTA
chr6 32985194 32986078 vista51623 32908847 76347
VISTA
chr6 32986611 32987175 vista51624 32908847 77764
VISTA
chr6 32993627 33000364 enh9054 32908847 84780
Blood (T-cell) Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Uterus Thymus
chr6 32996316 32996705 vista51625 32908847 87469
VISTA
chr6 32997077 32997532 vista51626 32908847 88230
VISTA
Transcript facotrs that regulate HLA-DMB[ENSG00000242574.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 32911938 32912637 POLR2A UCSC Txn Factor no Conserved 32908847 3091 108539700
chr6 32911997 32912407 YY1 UCSC Txn Factor no Conserved 32908847 3150 108539701
chr6 32912049 32912838 IKZF1 UCSC Txn Factor no Conserved 32908847 3202 108539702
chr6 32912133 32912501 RUNX3 UCSC Txn Factor no Conserved 32908847 3286 108539703
chr6 32912136 32912568 NFIC UCSC Txn Factor no Conserved 32908847 3289 108539704
chr6 32912150 32912501 SPI1 UCSC Txn Factor no Conserved 32908847 3303 108539705
chr6 32912242 32912245 MYB TRANSFAC yes 32908847 3395 70348148
chr6 32912260 32912279 CTCF JASPAR yes 32908847 3413 70348149
chr6 32912271 32912279 FOXL1 JASPAR yes 32908847 3424 70348150
chr6 32912327 32912340 ELF1 JASPAR yes 32908847 3480 70348151
chr6 32912329 32912340 ELF5 JASPAR yes 32908847 3482 70348152
chr6 32912329 32912340 ETV2 JASPAR yes 32908847 3482 70348153
chr6 32912330 32912340 ERF JASPAR yes 32908847 3483 70348154
chr6 32912330 32912340 ERG JASPAR yes 32908847 3483 70348155
chr6 32912330 32912340 ETS1 JASPAR yes 32908847 3483 70348156
chr6 32912330 32912340 FEV JASPAR yes 32908847 3483 70348157
chr6 32912330 32912340 FLI1 JASPAR yes 32908847 3483 70348158
chr6 32912330 32912341 ELK4 JASPAR yes 32908847 3483 70348159
chr6 32912330 32912341 FLI1 JASPAR yes 32908847 3483 70348160
chr6 32912331 32912339 FEV JASPAR yes 32908847 3484 70348161
chr6 32912349 32912354 H4TF1 TRANSFAC yes 32908847 3502 70348162
chr6 32912415 32912427 PKNOX1 JASPAR yes 32908847 3568 70348163
chr6 32912416 32912426 ID4 JASPAR yes 32908847 3569 70348164
chr6 32912416 32912426 MSC JASPAR yes 32908847 3569 70348165
chr6 32912416 32912426 TCF3 JASPAR yes 32908847 3569 70348166
chr6 32912417 32912426 SNAI2 JASPAR yes 32908847 3570 70348167
chr6 32912418 32912423 USF2 TRANSFAC yes 32908847 3571 70348168
chr6 32912431 32912446 FOXP1 JASPAR yes 32908847 3584 70348169
chr6 32912433 32912454 ZNF263 JASPAR yes 32908847 3586 70348170
chr6 32912434 32912442 FOXO3 JASPAR yes 32908847 3587 70348171
chr6 32912436 32912457 ZNF263 JASPAR yes 32908847 3589 70348172
chr6 32912438 32912443 ETS2 TRANSFAC yes 32908847 3591 70348173
chr6 32912440 32912448 EHF JASPAR yes 32908847 3593 70348174
chr6 32912442 32912449 SPIB JASPAR yes 32908847 3595 70348175
chr6 32912445 32912466 ZNF263 JASPAR yes 32908847 3598 70348176
chr6 32912447 32912457 SP1 JASPAR yes 32908847 3600 70348177
chr6 32912449 32912470 ZNF263 JASPAR yes 32908847 3602 70348178
chr6 32912456 32912474 IRF2 JASPAR yes 32908847 3609 70348179
chr6 32912458 32912473 SOX21 JASPAR yes 32908847 3611 70348180
chr6 32912458 32912474 SOX4 JASPAR yes 32908847 3611 70348181
chr6 32912466 32912470 YY1 TRANSFAC yes 32908847 3619 70348182
chr6 32912485 32912489 NFE TRANSFAC yes 32908847 3638 70348183
chr6 32912503 32912507 H1TF2 TRANSFAC yes 32908847 3656 70348184
chr6 32912503 32912507 NFE TRANSFAC yes 32908847 3656 70348185
chr6 32912503 32912507 SRF TRANSFAC yes 32908847 3656 70348186
chr6 32912504 32912519 MEF2C JASPAR yes 32908847 3657 70348187
chr6 32912514 32912517 MYB TRANSFAC yes 32908847 3667 70348188
chr6 32912517 32912521 YY1 TRANSFAC yes 32908847 3670 70348189
chr6 32912522 32912527 MYC TRANSFAC yes 32908847 3675 70348190
chr6 32912530 32912534 NFE TRANSFAC yes 32908847 3683 70348191
chr6 32912534 32912543 SOX9 JASPAR yes 32908847 3687 70348192
chr6 32912538 32912553 HNF1A JASPAR yes 32908847 3691 70348193
chr6 32912540 32912547 NKX3-1 JASPAR yes 32908847 3693 70348194
chr6 32912545 32912549 YY1 TRANSFAC yes 32908847 3698 70348195
chr6 32912545 32912558 POU3F3 JASPAR yes 32908847 3698 70348196
chr6 32912547 32912563 POU4F2 JASPAR yes 32908847 3700 70348197
chr6 32912547 32912563 POU4F3 JASPAR yes 32908847 3700 70348198
chr6 32912549 32912563 POU4F1 JASPAR yes 32908847 3702 70348199
chr6 32912549 32912564 HNF1A JASPAR yes 32908847 3702 70348200
chr6 32912550 32912560 ESX1 JASPAR yes 32908847 3703 70348201
chr6 32912550 32912560 GSX2 JASPAR yes 32908847 3703 70348202
chr6 32912550 32912560 HOXB2 JASPAR yes 32908847 3703 70348203
chr6 32912550 32912560 HOXB3 JASPAR yes 32908847 3703 70348204
chr6 32912550 32912560 LHX6 JASPAR yes 32908847 3703 70348205
chr6 32912550 32912560 MEOX2 JASPAR yes 32908847 3703 70348206
chr6 32912550 32912560 MNX1 JASPAR yes 32908847 3703 70348207
chr6 32912550 32912560 POU6F1 JASPAR yes 32908847 3703 70348208
chr6 32912550 32912560 RAX JASPAR yes 32908847 3703 70348209
chr6 32912550 32912562 HNF1B JASPAR yes 32908847 3703 70348210
chr6 32912550 32912563 HNF1B JASPAR yes 32908847 3703 70348211
chr6 32912550 32912564 POU4F1 JASPAR yes 32908847 3703 70348212
chr6 32912550 32912566 POU4F3 JASPAR yes 32908847 3703 70348213
chr6 32912551 32912559 LMX1A JASPAR yes 32908847 3704 70348214
chr6 32912551 32912559 LMX1B JASPAR yes 32908847 3704 70348215
chr6 32912551 32912559 NKX6-1 JASPAR yes 32908847 3704 70348216
chr6 32912551 32912559 NKX6-2 JASPAR yes 32908847 3704 70348217
chr6 32912551 32912559 VAX1 JASPAR yes 32908847 3704 70348218
chr6 32912551 32912559 VAX2 JASPAR yes 32908847 3704 70348219
chr6 32912551 32912559 VSX1 JASPAR yes 32908847 3704 70348220
chr6 32912551 32912559 VSX2 JASPAR yes 32908847 3704 70348221
chr6 32912554 32912566 FOXC2 JASPAR yes 32908847 3707 70348222
chr6 32912554 32912568 ONECUT3 JASPAR yes 32908847 3707 70348223
chr6 32912555 32912566 FOXB1 JASPAR yes 32908847 3708 70348224
chr6 32912555 32912566 FOXC1 JASPAR yes 32908847 3708 70348225
chr6 32912595 32912615 TP63 JASPAR yes 32908847 3748 70348226
chr6 32912596 32912614 TP73 JASPAR yes 32908847 3749 70348227
chr6 32912602 32912615 ZBTB18 JASPAR yes 32908847 3755 70348228
chr6 32912603 32912618 SCRT1 JASPAR yes 32908847 3756 70348229
chr6 32913044 32913050 YY1 JASPAR yes 32908847 4197 70348230
chr6 32913088 32913094 SOX10 JASPAR yes 32908847 4241 70348231
chr6 32913102 32913116 ATF7 JASPAR yes 32908847 4255 70348232
chr6 32913102 32913116 BATF3 JASPAR yes 32908847 4255 70348233
chr6 32913103 32913115 JDP2 JASPAR yes 32908847 4256 70348234
chr6 32913105 32913108 MYB TRANSFAC yes 32908847 4258 70348235
chr6 32913107 32913112 ATF1 TRANSFAC yes 32908847 4260 70348236
chr6 32913128 32913134 PEA3 TRANSFAC yes 32908847 4281 70348237
chr6 32913128 32913139 FLI1 JASPAR yes 32908847 4281 70348238
chr6 32913129 32913137 EHF JASPAR yes 32908847 4282 70348239
chr6 32913130 32913137 SPI1 JASPAR yes 32908847 4283 70348240
chr6 32913146 32913151 H4TF1 TRANSFAC yes 32908847 4299 70348241
chr6 32913150 32913165 FOXP1 JASPAR yes 32908847 4303 70348242
chr6 32913151 32913162 FOXP2 JASPAR yes 32908847 4304 70348243
chr6 32913175 32913187 MEF2A JASPAR yes 32908847 4328 70348244
chr6 32913189 32913551 RUNX3 UCSC Txn Factor no Conserved 32908847 4342 108539706
chr6 32913191 32913385 CEBPB UCSC Txn Factor no Conserved 32908847 4344 108539707
chr6 32913199 32913206 SPI1 JASPAR yes 32908847 4352 70348245
chr6 32913238 32913242 LFA1 TRANSFAC yes 32908847 4391 70348246
chr6 32913251 32913254 MYB TRANSFAC yes 32908847 4404 70348247
chr6 32913259 32913271 YY1 JASPAR yes 32908847 4412 70348248
chr6 32913264 32913268 YY1 TRANSFAC yes 32908847 4417 70348249
chr6 32913265 32913280 FOXP1 JASPAR yes 32908847 4418 70348250
chr6 32913268 32913279 FOXP2 JASPAR yes 32908847 4421 70348251
chr6 32913269 32913273 TEAD2 TRANSFAC yes 32908847 4422 70348252
chr6 32913269 32913274 TBP TRANSFAC yes 32908847 4422 70348253
chr6 32913270 32913278 FOXG1 JASPAR yes 32908847 4423 70348254
chr6 32913272 32913278 HiNF-A TRANSFAC yes 32908847 4425 70348255
chr6 32913280 32913291 CEBPB JASPAR yes 32908847 4433 70348256
chr6 32913281 32913291 CEBPB JASPAR yes 32908847 4434 70348257
chr6 32913281 32913291 CEBPE JASPAR yes 32908847 4434 70348258
chr6 32913281 32913291 CEBPG JASPAR yes 32908847 4434 70348259
chr6 32913281 32913292 CEBPA JASPAR yes 32908847 4434 70348260
chr6 32913294 32913307 EOMES JASPAR yes 32908847 4447 70348261
chr6 32913296 32913526 EBF1 UCSC Txn Factor no Conserved 32908847 4449 108539708
chr6 32913338 32913582 EGR1 UCSC Txn Factor no Conserved 32908847 4491 108539709
chr6 32913353 32913361 TBX5 JASPAR yes 32908847 4506 70348262
chr6 32913359 32913370 FLI1 JASPAR yes 32908847 4512 70348263
chr6 32913367 32913373 NFIC JASPAR yes 32908847 4520 70348264
chr6 32913388 32913392 H1TF2 TRANSFAC yes 32908847 4541 70348265
chr6 32913388 32913392 NFE TRANSFAC yes 32908847 4541 70348266
chr6 32913388 32913392 SRF TRANSFAC yes 32908847 4541 70348267
chr6 32913393 32913397 NFE TRANSFAC yes 32908847 4546 70348268
chr6 32913397 32913401 H1TF2 TRANSFAC yes 32908847 4550 70348269
chr6 32913397 32913401 NFE TRANSFAC yes 32908847 4550 70348270
chr6 32913397 32913401 SRF TRANSFAC yes 32908847 4550 70348271
chr6 32913401 32913407 MZF1 JASPAR yes 32908847 4554 70348272
chr6 32913401 32913421 RREB1 JASPAR yes 32908847 4554 70348273
chr6 32913402 32913422 RREB1 JASPAR yes 32908847 4555 70348274
chr6 32913406 32913416 SP1 JASPAR yes 32908847 4559 70348275
chr6 32913409 32913424 NR2C2 JASPAR yes 32908847 4562 70348276
chr6 32913417 32913423 YY1 JASPAR yes 32908847 4570 70348277
chr6 32913421 32913442 ZNF263 JASPAR yes 32908847 4574 70348278
chr6 32913422 32913434 INSM1 JASPAR yes 32908847 4575 70348279
chr6 32913423 32913440 RARA JASPAR yes 32908847 4576 70348280
chr6 32913423 32913440 RXRA JASPAR yes 32908847 4576 70348281
chr6 32913427 32913442 JUND JASPAR yes 32908847 4580 70348282
chr6 32913428 32913441 JUN JASPAR yes 32908847 4581 70348283
chr6 32913429 32913436 JUN TRANSFAC yes 32908847 4582 70348284
chr6 32913437 32913457 RREB1 JASPAR yes 32908847 4590 70348285
chr6 32913438 32913448 SP1 JASPAR yes 32908847 4591 70348286
chr6 32913440 32913445 SP1 TRANSFAC yes 32908847 4593 70348287
chr6 32913440 32913455 RUNX2 JASPAR yes 32908847 4593 70348288
chr6 32913441 32913461 RREB1 JASPAR yes 32908847 4594 70348289
chr6 32913443 32913463 RREB1 JASPAR yes 32908847 4596 70348290
chr6 32913465 32913469 NFE TRANSFAC yes 32908847 4618 70348291
chr6 32913484 32913498 NR2F1 JASPAR yes 32908847 4637 70348292
chr6 32913484 32913499 HNF4G JASPAR yes 32908847 4637 70348293
chr6 32913484 32913499 NR2C2 JASPAR yes 32908847 4637 70348294
chr6 32913487 32913500 NR2F1 JASPAR yes 32908847 4640 70348295
chr6 32913489 32913500 ESRRA JASPAR yes 32908847 4642 70348296
chr6 32913490 32913498 NR4A2 JASPAR yes 32908847 4643 70348297
chr6 32913490 32913505 HNF4A JASPAR yes 32908847 4643 70348298
chr6 32913491 32913506 HNF4G JASPAR yes 32908847 4644 70348299
chr6 32913498 32913506 RHOXF1 JASPAR yes 32908847 4651 70348300
SNPs associated with HLA-DMB[ENSG00000242574.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 33793332 rs17529077 C G,T 884485 Heart 0.0686685 8976325
chr6 33881570 rs9469625 T A 972723 Uterus 0.28162 8977524
chr6 33846066 rs77024343 A G 937219 Liver 0.458337 8976918
Details of HLA-DMB[ENSG00000242574.4]
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Genomic Location chr6:32902406-32908847[-]
TSS 32908847
Gene Name HLA-DMB
Ensembl ID ENSG00000242574.4
ENTREZID 3109
Uniprot
P28068
Protein Name
DM beta chain
HLA class II histocompatibility antigen
HLA-DMB
HLA-DMB protein
MHC class II HLA-DMB
MHC class II antigen
MHC class II antigen HLA-DM beta chain
MHC class II antigen beta chain
Expression levels of HLA-DMB[ENSG00000242574.4]
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