EnhancerDB
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  3. rs534261071[chr16:85649256]
Enhancers that have rs534261071[chr16:85649256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85640485 85664563 enh16874
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Liver Stomach Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs534261071[chr16:85649256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85643905 85651250 POLR2A UCSC Txn Factor no Conserved 108216765
chr16 85643905 85651250 POLR2A UCSC Txn Factor no Conserved 108216766
chr16 85646186 85655686 TCF7L2 GTRD no Colon (HCT116) 108216768
chr16 85646186 85655686 TCF7L2 GTRD no Colon (HCT116) 108216769
chr16 85646208 85651068 TCF7L2 GTRD no Colon (HCT116) 108216770
chr16 85646208 85651068 TCF7L2 GTRD no Colon (HCT116) 108216771
chr16 85646299 85655064 TCF7L2 GTRD no Colon (HCT116) 108216772
chr16 85646299 85655064 TCF7L2 GTRD no Colon (HCT116) 108216773
chr16 85647455 85651063 ZNF143 GTRD no Epithelial (MCF-7) 21730782
chr16 85647455 85651063 ZNF143 GTRD no Epithelial (MCF-7) 108216774
chr16 85647455 85651063 ZNF143 GTRD no Epithelial (MCF-7) 108216775
chr16 85647842 85649434 ZNF143 GTRD no Epithelial (MCF-7) 21730783
chr16 85647842 85649434 ZNF143 GTRD no Epithelial (MCF-7) 108216776
chr16 85648050 85650153 ZNF274 GTRD no Bone Marrow (K562) 21730784
chr16 85648050 85650153 ZNF274 GTRD no Bone Marrow (K562) 108216777
chr16 85648853 85649509 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21730808
chr16 85648853 85649509 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108216812
chr16 85648862 85649517 ZNF274 GTRD no Bone Marrow (K562) 21730809
chr16 85648862 85649517 ZNF274 GTRD no Bone Marrow (K562) 108216813
chr16 85648915 85649259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730810
chr16 85648915 85649259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216814
chr16 85648916 85649420 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21730811
chr16 85648916 85649420 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216815
chr16 85649246 85654064 TCF7L2 GTRD no Colon (HCT116) 108216816
chr16 85649251 85649258 JUN TRANSFAC yes 12084178
Genes associated with rs534261071[chr16:85649256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More