EnhancerDB
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  3. rs542531878[chr16:85369058]
Enhancers that have rs542531878[chr16:85369058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs542531878[chr16:85369058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85367918 85380182 ZNF143 GTRD no Epithelial (MCF-7) 21723881
chr16 85367918 85380182 ZNF143 GTRD no Epithelial (MCF-7) 108213816
chr16 85367931 85373653 TCF7L2 GTRD no Colon (HCT116) 21723882
chr16 85367931 85373653 TCF7L2 GTRD no Colon (HCT116) 108213817
chr16 85368075 85371041 ZNF274 GTRD no Bone Marrow (K562) 21723887
chr16 85368075 85371041 ZNF274 GTRD no Bone Marrow (K562) 108213822
chr16 85368553 85369200 ZNF274 GTRD no Bone Marrow (K562) 21723917
chr16 85368553 85369200 ZNF274 GTRD no Bone Marrow (K562) 108213855
chr16 85368611 85371091 ZNF274 GTRD no Bone Marrow (K562) 21723922
chr16 85368611 85371091 ZNF274 GTRD no Bone Marrow (K562) 108213861
chr16 85368611 85372097 ZNF274 GTRD no Bone Marrow (K562) 21723923
chr16 85368611 85372097 ZNF274 GTRD no Bone Marrow (K562) 108213862
chr16 85368622 85369222 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723924
chr16 85368622 85369222 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108213863
chr16 85368647 85371407 ZNF274 GTRD no Bone Marrow (K562) 21723926
chr16 85368647 85371407 ZNF274 GTRD no Bone Marrow (K562) 108213865
chr16 85368668 85371283 ZNF143 GTRD no Epithelial (MCF-7) 21723927
chr16 85368668 85371283 ZNF143 GTRD no Epithelial (MCF-7) 108213866
chr16 85368673 85369109 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723928
chr16 85368673 85369109 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108213867
chr16 85368705 85369221 TCF7L2 UCSC Txn Factor no Conserved 108213868
chr16 85368715 85371036 ZNF143 GTRD no Epithelial (MCF-7) 21723930
chr16 85368715 85371036 ZNF143 GTRD no Epithelial (MCF-7) 108213871
chr16 85368804 85369308 ZNF274 GTRD no Bone Marrow (K562) 21723936
chr16 85368860 85370614 ZNF274 GTRD no Bone Marrow (K562) 21723938
chr16 85368865 85369155 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723939
chr16 85368887 85370644 ZNF274 GTRD no Bone Marrow (K562) 21723940
chr16 85368905 85369127 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21723941
chr16 85368943 85369187 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21723942
chr16 85369007 85369276 ZNF274 GTRD no Bone Marrow (K562) 21723943
chr16 85369026 85371865 ZNF143 GTRD no Epithelial (MCF-7) 21723944
chr16 85369053 85369058 MYC TRANSFAC yes 12049467
Genes associated with rs542531878[chr16:85369058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More