EnhancerDB
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  3. rs548972221[chr1:110435542]
Enhancers that have rs548972221[chr1:110435542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110412890 110446635 enh12129
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548972221[chr1:110435542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110434595 110435981 ZNF274 GTRD no Bone Marrow (K562) 21328360
chr1 110434595 110435981 ZNF274 GTRD no Bone Marrow (K562) 107820530
chr1 110434653 110435591 ZNF274 GTRD no Bone Marrow (K562) 21328361
chr1 110434653 110435591 ZNF274 GTRD no Bone Marrow (K562) 107820531
chr1 110434844 110435674 ZNF274 GTRD no Bone Marrow (K562) 21328363
chr1 110434844 110435674 ZNF274 GTRD no Bone Marrow (K562) 107820533
chr1 110435015 110435545 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328370
chr1 110435015 110435545 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820540
chr1 110435035 110435551 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328371
chr1 110435035 110435551 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820541
chr1 110435091 110435567 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328372
chr1 110435091 110435567 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107820542
chr1 110435458 110435828 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21328376
chr1 110435523 110435542 REST JASPAR yes 31450935
chr1 110435539 110435553 TLX1 JASPAR yes 31450937
chr1 110435540 110435554 TLX1 JASPAR yes 31450938
Genes associated with rs548972221[chr1:110435542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More