EnhancerDB
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  3. rs62050672[chr16:85240598]
Enhancers that have rs62050672[chr16:85240598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs62050672[chr16:85240598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85239278 85240667 ZNF274 GTRD no Blood (GM12878) 21721137
chr16 85239834 85241511 ZNF143 GTRD no Epithelial (MCF-7) 21721148
chr16 85239838 85241003 ZNF143 GTRD no Epithelial (MCF-7) 21721149
chr16 85239929 85240803 TCF7L2 GTRD no Colon (HCT116) 21721150
chr16 85240036 85241490 TCF7L2 GTRD no Colon (HCT116) 21721153
chr16 85240129 85240928 TCF7L2 GTRD no Colon (HCT116) 21721155
chr16 85240143 85242565 TCF7L2 GTRD no Colon (HCT116) 21721156
chr16 85240183 85240924 TCF7L2 GTRD no Colon (HCT116) 21721157
chr16 85240215 85240667 TCF7L2 GTRD no Colon (HCT116) 21721158
chr16 85240474 85240754 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721159
chr16 85240597 85240602 SP1 TRANSFAC yes 12032653
Genes associated with rs62050672[chr16:85240598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More