EnhancerDB
  1. Home
  2. TFBS
  3. SOX2[chr1:171397915-171398345]
Chromosome characteristics of SOX2[chr1:171397915-171398345]
Back to top
Enhancers possibly regulated by SOX2[chr1:171397915-171398345]
Back to top
Chrom Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
SNP sites on SOX2[chr1:171397915-171398345]
Back to top
Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr1 171397946 rs12564075 C T 724143
chr1 171397972 rs11579231 G A 724144
chr1 171398063 rs200363239 ATCTGGG A 724145
chr1 171398073 rs142052216 TG T 724146
chr1 171398078 rs182013805 T A,C 724147
chr1 171398090 rs140775342 G A 724148
chr1 171398104 rs12065796 G C,T 724149
chr1 171398196 rs186392464 C T 724150
chr1 171398200 rs190500831 T C 724151
chr1 171398214 rs58479321 G A 724152
chr1 171398232 rs60012572 G A,C 724153
chr1 171398328 rs180954821 G A 724154
chr1 171398331 rs546423807 A C,G 724155
chr1 171398335 rs185908994 G A,T 724156
Genes possibly regulated by SOX2[chr1:171397915-171398345]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by SOX2[chr1:171397915-171398345]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
Back to top
No results