EnhancerDB
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  3. SOX2[chr1:171399389-171399813]
Chromosome characteristics of SOX2[chr1:171399389-171399813]
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Enhancers possibly regulated by SOX2[chr1:171399389-171399813]
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Chrom Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
SNP sites on SOX2[chr1:171399389-171399813]
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Chrom Position dbSNP ID Reference Allele Alternative Allele id More
chr1 171399428 rs116179153 C T 724180
chr1 171399476 rs550700853 T A 724181
chr1 171399563 rs116865877 G A 724182
chr1 171399568 rs148128310 C T 724183
chr1 171399598 rs114759074 C T 724184
chr1 171399680 rs10912984 A T 724185
chr1 171399768 rs12072674 C G 724186
chr1 171399798 rs527580597 T C 724187
Genes possibly regulated by SOX2[chr1:171399389-171399813]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of Genes
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No results
miRNAs possibly regulated by SOX2[chr1:171399389-171399813]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End strand miRNA Name miRBase ID TSS TSI of Normal tissues TSI of Cancer tissues Distance to TFBS id More
Expression level of miRNAs
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No results