EnhancerDB
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Enhancers that regulate XYLT2[ENSG00000015532.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 48333165 48343735 enh44448 48423453 79718
Muscle (Myotube) Uterus Stomach
chr17 48338432 48338651 vista25109 48423453 84802
VISTA
chr17 48346425 48350755 enh99429 48423453 72698
Uterus
chr17 48348027 48348139 vista25110 48423453 75314
VISTA
chr17 48359545 48363695 enh99430 48423453 59758
Uterus
chr17 48364675 48370555 enh32226 48423453 52898
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Uterus Epithelial (MCF-7)
chr17 48367346 48367814 vista25111 48423453 55639
VISTA
chr17 48372711 48387355 enh44449 48423453 36098
Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr17 48386710 48386950 vista25112 48423453 36503
VISTA
chr17 48387705 48400939 enh58763 48423453 22514
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Stomach Uterus Epithelial (MCF-7)
chr17 48403515 48413115 enh17217 48423453 10338
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Muscle (Myoblast) Stomach
chr17 48421685 48421964 vista25113 48423453 1489
VISTA
chr17 48467638 48467952 vista25114 48423453 44185
VISTA
chr17 48482105 48487455 enh101503 48423453 58652
Thyroid
chr17 48504245 48510855 enh17218 48423453 80792
Esophagus Placenta Liver (HepG2) Epithelial (MCF-7)
chr17 48504874 48504976 vista25115 48423453 81421
VISTA
chr17 48515685 48532515 enh17219 48423453 92232
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript facotrs that regulate XYLT2[ENSG00000015532.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 48421693 48421705 POU2F1 JASPAR yes 48423453 1748 21254347
chr17 48421693 48421706 POU3F3 JASPAR yes 48423453 1747 21254348
chr17 48421693 48421707 POU1F1 JASPAR yes 48423453 1746 21254349
chr17 48421694 48421706 POU3F1 JASPAR yes 48423453 1747 21254350
chr17 48421694 48421706 POU3F2 JASPAR yes 48423453 1747 21254351
chr17 48421720 48421725 SP1 TRANSFAC yes 48423453 1728 21254352
chr17 48421729 48421749 PPARG JASPAR yes 48423453 1704 21254353
chr17 48421732 48421753 IRF1 JASPAR yes 48423453 1700 21254354
chr17 48421734 48421749 PRDM1 JASPAR yes 48423453 1704 21254355
chr17 48421734 48421749 STAT2 JASPAR yes 48423453 1704 21254356
chr17 48421736 48421748 IRF1 JASPAR yes 48423453 1705 21254357
chr17 48421736 48421750 IRF7 JASPAR yes 48423453 1703 21254358
chr17 48421736 48421751 IRF9 JASPAR yes 48423453 1702 21254359
chr17 48421760 48421772 HNF1B JASPAR yes 48423453 1681 21254360
chr17 48421771 48421782 NFIL3 JASPAR yes 48423453 1671 21254361
chr17 48421772 48421784 DBP JASPAR yes 48423453 1669 21254362
chr17 48421772 48421784 HLF JASPAR yes 48423453 1669 21254363
chr17 48421772 48421784 TEF JASPAR yes 48423453 1669 21254364
chr17 48421774 48421785 NFIL3 JASPAR yes 48423453 1668 21254365
chr17 48421777 48421781 TEAD2 TRANSFAC yes 48423453 1672 21254366
chr17 48421783 48421788 GATA2 JASPAR yes 48423453 1665 21254367
chr17 48421783 48421795 FOXI1 JASPAR yes 48423453 1658 21254368
chr17 48421786 48421790 YY1 TRANSFAC yes 48423453 1663 21254369
chr17 48421786 48421797 HOXA10 JASPAR yes 48423453 1656 21254370
chr17 48421787 48421796 CDX1 JASPAR yes 48423453 1657 21254371
chr17 48421787 48421798 CDX2 JASPAR yes 48423453 1655 21254372
chr17 48421792 48421799 NKX3-1 JASPAR yes 48423453 1654 21254373
chr17 48421793 48421804 NFIL3 JASPAR yes 48423453 1649 21254374
chr17 48421794 48421806 DBP JASPAR yes 48423453 1647 21254375
chr17 48421794 48421806 HLF JASPAR yes 48423453 1647 21254376
chr17 48421794 48421806 TEF JASPAR yes 48423453 1647 21254377
chr17 48421796 48421807 NFIL3 JASPAR yes 48423453 1646 21254378
chr17 48421799 48421803 TEAD2 TRANSFAC yes 48423453 1650 21254379
chr17 48421818 48421834 SOX8 JASPAR yes 48423453 1619 21254380
chr17 48421821 48421825 YY1 TRANSFAC yes 48423453 1628 21254381
chr17 48421829 48421845 GLIS1 JASPAR yes 48423453 1608 21254382
chr17 48421832 48421846 E2F7 JASPAR yes 48423453 1607 21254383
chr17 48421834 48421844 ZNF740 JASPAR yes 48423453 1609 21254384
chr17 48421840 48421857 BCL6B JASPAR yes 48423453 1596 21254385
chr17 48421847 48421853 NFIC JASPAR yes 48423453 1600 21254386
chr17 48421859 48421873 EBF1 JASPAR yes 48423453 1580 21254387
chr17 48421861 48421872 EBF1 JASPAR yes 48423453 1581 21254388
chr17 48421864 48422383 TCF7L2 GTRD no Colon (HCT116) 48423453 1070 108270794
chr17 48421876 48421886 HOXC10 JASPAR yes 48423453 1567 21254389
chr17 48421876 48421886 HOXD13 JASPAR yes 48423453 1567 21254390
chr17 48421876 48421887 HOXC11 JASPAR yes 48423453 1566 21254391
chr17 48421876 48421887 HOXC13 JASPAR yes 48423453 1566 21254392
chr17 48421877 48421887 GSX2 JASPAR yes 48423453 1566 21254393
chr17 48421878 48421886 NKX6-1 JASPAR yes 48423453 1567 21254394
chr17 48421878 48421886 NKX6-2 JASPAR yes 48423453 1567 21254395
chr17 48421878 48421888 POU6F2 JASPAR yes 48423453 1565 21254396
chr17 48421889 48421903 ONECUT1 JASPAR yes 48423453 1550 21254397
chr17 48421889 48421903 ONECUT2 JASPAR yes 48423453 1550 21254398
chr17 48421889 48421903 ONECUT3 JASPAR yes 48423453 1550 21254399
chr17 48421891 48421902 FOXC1 JASPAR yes 48423453 1551 21254400
chr17 48421893 48421908 HNF1A JASPAR yes 48423453 1545 21254401
chr17 48421894 48421907 HNF1B JASPAR yes 48423453 1546 21254402
chr17 48421894 48421908 POU4F1 JASPAR yes 48423453 1545 21254403
chr17 48421894 48421910 POU4F2 JASPAR yes 48423453 1543 21254404
chr17 48421894 48421910 POU4F3 JASPAR yes 48423453 1543 21254405
chr17 48421895 48421907 HNF1B JASPAR yes 48423453 1546 21254406
chr17 48421898 48421909 FOXB1 JASPAR yes 48423453 1544 21254407
chr17 48421898 48421909 PHOX2A JASPAR yes 48423453 1544 21254408
chr17 48421898 48421909 PROP1 JASPAR yes 48423453 1544 21254409
chr17 48421899 48421903 YY1 TRANSFAC yes 48423453 1550 21254410
chr17 48421901 48421911 ALX3 JASPAR yes 48423453 1542 21254411
chr17 48421901 48421911 ESX1 JASPAR yes 48423453 1542 21254412
chr17 48421901 48421911 GSX2 JASPAR yes 48423453 1542 21254413
chr17 48421901 48421911 HESX1 JASPAR yes 48423453 1542 21254414
chr17 48421901 48421911 LHX6 JASPAR yes 48423453 1542 21254415
chr17 48421901 48421911 MIXL1 JASPAR yes 48423453 1542 21254416
chr17 48421901 48421911 MNX1 JASPAR yes 48423453 1542 21254417
chr17 48421901 48421911 NOTO JASPAR yes 48423453 1542 21254418
chr17 48421901 48421911 RAX JASPAR yes 48423453 1542 21254419
chr17 48421902 48421910 ISX JASPAR yes 48423453 1543 21254420
chr17 48421902 48421910 LMX1A JASPAR yes 48423453 1543 21254421
chr17 48421902 48421910 LMX1B JASPAR yes 48423453 1543 21254422
chr17 48421902 48421910 NKX6-1 JASPAR yes 48423453 1543 21254423
chr17 48421902 48421910 NKX6-2 JASPAR yes 48423453 1543 21254424
chr17 48421902 48421910 PRRX1 JASPAR yes 48423453 1543 21254425
chr17 48421902 48421910 RAX2 JASPAR yes 48423453 1543 21254426
chr17 48421902 48421910 SHOX JASPAR yes 48423453 1543 21254427
chr17 48421902 48421910 UNCX JASPAR yes 48423453 1543 21254428
chr17 48421902 48421910 VAX1 JASPAR yes 48423453 1543 21254429
chr17 48421902 48421916 POU1F1 JASPAR yes 48423453 1537 21254430
chr17 48421903 48421915 POU3F1 JASPAR yes 48423453 1538 21254431
chr17 48421903 48421915 POU3F2 JASPAR yes 48423453 1538 21254432
chr17 48421903 48421916 POU3F3 JASPAR yes 48423453 1537 21254433
chr17 48421904 48421916 POU2F1 JASPAR yes 48423453 1537 21254434
chr17 48421905 48421914 POU3F4 JASPAR yes 48423453 1539 21254435
chr17 48421905 48421914 POU5F1B JASPAR yes 48423453 1539 21254436
chr17 48421907 48421910 MYB TRANSFAC yes 48423453 1543 21254437
chr17 48421937 48421945 FOXO3 JASPAR yes 48423453 1508 21254438
chr17 48421939 48421946 NFATC2 JASPAR yes 48423453 1507 21254439
chr17 48421951 48421956 MYB TRANSFAC yes 48423453 1497 21254440
chr17 48421952 48421961 NKX2-8 JASPAR yes 48423453 1492 21254441
SNPs associated with XYLT2[ENSG00000015532.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 48505499 rs6504655 G A 65000 Heart 0.139828 4923187
chr17 48497263 rs62062085 T C 56764 Pancreas 0.219714 4923072
chr17 48486179 rs9797156 G A 45680 Breast 0.144264 4923039
chr17 48125379 rs4793631 G A 298074 Spleen 0.34897 4920515
chr17 49032587 rs11651368 G A 592088 Ovary 0.0400225 4927442
chr17 47688881 rs3217104 T TAGAG 734572 Uterus 0.42535 4917115
chr17 48406604 rs2586456 T C 16849 Liver 0.00569178 4922735
chr17 48373953 rs12936244 A G 49500 Stomach 0.245787 4922280
chr17 48557863 rs7208018 T C 117364 Adrenal 0.0882182 4923593
Details of XYLT2[ENSG00000015532.5]
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Genomic Location chr17:48423453-48440499[+]
TSS 48423453
Gene Name XYLT2
Ensembl ID ENSG00000015532.5
ENTREZID 64132
Uniprot
Q9H1B5
B4DT06
Protein Name
Xylosyltransferase 2
Expression levels of XYLT2[ENSG00000015532.5]
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