EnhancerDB
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Enhancers that regulate TRAF4[ENSG00000076604.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 27060365 27064515 enh17073 27071002 6487
Placenta
chr17 27072804 27073286 vista24304 27071002 1802
VISTA
chr17 27100910 27101180 vista24305 27071002 29908
VISTA
chr17 27104790 27105049 vista24306 27071002 33788
VISTA
chr17 27106105 27110255 enh104308 27071002 35103
Peripheral Blood (MM.1S)
chr17 27112558 27112737 vista24307 27071002 41556
VISTA
chr17 27116093 27116114 vista24308 27071002 45091
VISTA
chr17 27118425 27122607 enh69252 27071002 47423
Bone Marrow (K562) Neural Stem Cells (H9)
chr17 27118575 27118718 vista24309 27071002 47573
VISTA
chr17 27125345 27129495 enh4314 27071002 54343
Blood (Karpas-422)
chr17 27129097 27129445 vista24310 27071002 58095
VISTA
chr17 27132321 27138735 enh4315 27071002 61319
Bone Marrow (K562) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr17 27138672 27138846 vista24311 27071002 67670
VISTA
chr17 27144825 27148975 enh4316 27071002 73823
Blood (Karpas-422)
chr17 27153714 27158004 enh102562 27071002 82712
Bone (Osteoblast)
chr17 27164285 27175528 enh75885 27071002 93283
Muscle (A673) Prostate (RWPE1)
Transcript facotrs that regulate TRAF4[ENSG00000076604.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 27069870 27079874 POLR2A UCSC Txn Factor no Conserved 27071002 1132 108246142
chr17 27071343 27076795 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 27071002 341 108246143
chr17 27071795 27072884 ZNF274 GTRD no Bone Marrow (K562) 27071002 793 108246144
chr17 27071798 27072944 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 796 108246145
chr17 27072418 27072854 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 27071002 1416 108246146
chr17 27072543 27072899 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 1541 108246147
chr17 27072737 27073039 ZNF143 GTRD no Epithelial (MCF-7) 27071002 1735 108246148
chr17 27072740 27073060 MAFK UCSC Txn Factor no Conserved 27071002 1738 108246149
chr17 27072740 27073060 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 1738 108246150
chr17 27072747 27073103 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 1745 108246151
chr17 27072748 27073038 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 1746 108246152
chr17 27072755 27073035 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 27071002 1753 108246153
chr17 27072760 27073040 MAFF UCSC Txn Factor no Conserved 27071002 1758 108246154
chr17 27072760 27073040 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 27071002 1758 108246155
chr17 27072812 27073062 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 1810 108246156
chr17 27072816 27073276 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 27071002 1814 108246157
chr17 27072822 27072836 TLX1 JASPAR yes 27071002 1820 21213845
chr17 27072826 27073406 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 1824 108246158
chr17 27072850 27072865 TFAP2A JASPAR yes 27071002 1848 21213846
chr17 27072852 27072867 TFAP2C JASPAR yes 27071002 1850 21213847
chr17 27072853 27072864 TFAP2A JASPAR yes 27071002 1851 21213848
chr17 27072853 27072950 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 27071002 1851 108246159
chr17 27072874 27072968 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 27071002 1872 108246160
chr17 27072877 27072881 NFE TRANSFAC yes 27071002 1875 21213849
chr17 27072881 27072887 SP1 TRANSFAC yes 27071002 1879 21213850
chr17 27072897 27072918 MAFG JASPAR yes 27071002 1895 21213851
chr17 27072902 27072920 MAFF JASPAR yes 27071002 1900 21213852
chr17 27072903 27072918 MAFK JASPAR yes 27071002 1901 21213853
chr17 27072906 27073153 ZNF143 GTRD no Epithelial (MCF-7) 27071002 1904 108246161
chr17 27072907 27072918 NRL JASPAR yes 27071002 1905 21213854
chr17 27072912 27072922 TEAD1 JASPAR yes 27071002 1910 21213855
chr17 27072912 27072922 TEAD4 JASPAR yes 27071002 1910 21213856
chr17 27072912 27072924 TEAD1 JASPAR yes 27071002 1910 21213857
chr17 27072913 27072921 TEAD3 JASPAR yes 27071002 1911 21213858
chr17 27072937 27072947 SP1 JASPAR yes 27071002 1935 21213859
chr17 27072938 27072944 SP1 TRANSFAC yes 27071002 1936 21213860
chr17 27072938 27072948 SP1 JASPAR yes 27071002 1936 21213861
chr17 27072938 27072953 ZIC3 JASPAR yes 27071002 1936 21213862
chr17 27072939 27072954 TFAP2C JASPAR yes 27071002 1937 21213863
chr17 27072942 27072953 EBF1 JASPAR yes 27071002 1940 21213864
chr17 27072942 27072956 PLAG1 JASPAR yes 27071002 1940 21213865
chr17 27072943 27072957 PLAG1 JASPAR yes 27071002 1941 21213866
chr17 27072954 27073484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 1952 108246162
chr17 27072964 27072970 MZF1 JASPAR yes 27071002 1962 21213867
chr17 27072979 27073635 ZNF274 GTRD no Bone Marrow (K562) 27071002 1977 108246163
chr17 27072995 27073002 ETS1 TRANSFAC yes 27071002 1993 21213868
chr17 27072995 27073428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 1993 108246164
chr17 27072996 27073004 EHF JASPAR yes 27071002 1994 21213869
chr17 27073000 27073015 ESR2 JASPAR yes 27071002 1998 21213870
chr17 27073000 27073020 ESR1 JASPAR yes 27071002 1998 21213871
chr17 27073002 27073702 ZNF143 GTRD no Epithelial (MCF-7) 27071002 2000 108246165
chr17 27073004 27073508 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 2002 108246166
chr17 27073007 27073022 TFAP2A JASPAR yes 27071002 2005 21213872
chr17 27073009 27073022 TFAP2A JASPAR yes 27071002 2007 21213873
chr17 27073009 27073022 TFAP2B JASPAR yes 27071002 2007 21213874
chr17 27073009 27073022 TFAP2C JASPAR yes 27071002 2007 21213875
chr17 27073014 27073023 THAP1 JASPAR yes 27071002 2012 21213876
chr17 27073017 27073021 LFA1 TRANSFAC yes 27071002 2015 21213877
chr17 27073035 27073050 RUNX2 JASPAR yes 27071002 2033 21213878
chr17 27073047 27073068 REST JASPAR yes 27071002 2045 21213879
chr17 27073050 27073061 ESRRA JASPAR yes 27071002 2048 21213880
chr17 27073050 27073061 ESRRB JASPAR yes 27071002 2048 21213881
chr17 27073052 27073661 ZNF143 GTRD no Epithelial (MCF-7) 27071002 2050 108246167
chr17 27073054 27073548 ZNF143 GTRD no Epithelial (MCF-7) 27071002 2052 108246168
chr17 27073056 27073075 PAX5 JASPAR yes 27071002 2054 21213882
chr17 27073057 27073063 NFIC JASPAR yes 27071002 2055 21213883
chr17 27073059 27073076 PAX1 JASPAR yes 27071002 2057 21213884
chr17 27073059 27073076 PAX9 JASPAR yes 27071002 2057 21213885
chr17 27073062 27073067 MYB TRANSFAC yes 27071002 2060 21213886
chr17 27073062 27073466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 2060 108246169
chr17 27073081 27073494 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 27071002 2079 108246170
chr17 27073084 27073099 LEF1 JASPAR yes 27071002 2082 21213887
chr17 27073085 27073093 RHOXF1 JASPAR yes 27071002 2083 21213888
chr17 27073086 27073107 ZNF263 JASPAR yes 27071002 2084 21213889
chr17 27073089 27073433 STAT3 UCSC Txn Factor no Conserved 27071002 2087 108246171
chr17 27073089 27073433 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 2087 108246172
chr17 27073089 27073485 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 2087 108246173
chr17 27073095 27073116 ZNF263 JASPAR yes 27071002 2093 21213890
chr17 27073101 27073106 SP1 TRANSFAC yes 27071002 2099 21213891
chr17 27073115 27073130 TFAP2A JASPAR yes 27071002 2113 21213892
chr17 27073122 27073126 LFA1 TRANSFAC yes 27071002 2120 21213893
chr17 27073122 27073443 ZNF274 GTRD no Bone Marrow (K562) 27071002 2120 108246174
chr17 27073125 27073130 MYC TRANSFAC yes 27071002 2123 21213894
chr17 27073131 27073135 LFA1 TRANSFAC yes 27071002 2129 21213895
chr17 27073146 27073456 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 27071002 2144 108246175
chr17 27073147 27073151 H4TF2 TRANSFAC yes 27071002 2145 21213896
chr17 27073179 27073332 TFAP2C UCSC Txn Factor no Conserved 27071002 2177 108246176
chr17 27073179 27073332 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 2177 108246177
chr17 27073189 27073453 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 27071002 2187 108246178
chr17 27073193 27073568 ZNF143 GTRD no Epithelial (MCF-7) 27071002 2191 108246179
chr17 27073225 27073236 FOS JASPAR yes 27071002 2223 21213897
chr17 27073225 27073236 FOSL1 JASPAR yes 27071002 2223 21213898
chr17 27073225 27073236 JUND JASPAR yes 27071002 2223 21213899
chr17 27073226 27073240 JUN JASPAR yes 27071002 2224 21213900
chr17 27073227 27073238 BATF JASPAR yes 27071002 2225 21213901
chr17 27073237 27073248 STAT1 JASPAR yes 27071002 2235 21213902
chr17 27073237 27073248 STAT3 JASPAR yes 27071002 2235 21213903
chr17 27073239 27073251 TEAD1 JASPAR yes 27071002 2237 21213904
chr17 27073242 27073250 TEAD3 JASPAR yes 27071002 2240 21213905
chr17 27073248 27073257 SP1 TRANSFAC yes 27071002 2246 21213906
chr17 27073249 27073264 TFAP2A JASPAR yes 27071002 2247 21213907
chr17 27073249 27073264 TFAP2C JASPAR yes 27071002 2247 21213908
chr17 27073251 27073257 NFE2 TRANSFAC yes 27071002 2249 21213909
chr17 27073252 27073264 TFAP2A JASPAR yes 27071002 2250 21213910
chr17 27073252 27073264 TFAP2B JASPAR yes 27071002 2250 21213911
chr17 27073252 27073264 TFAP2C JASPAR yes 27071002 2250 21213912
chr17 27073252 27073267 TFAP2A JASPAR yes 27071002 2250 21213913
chr17 27073253 27073262 TFAP2A JASPAR yes 27071002 2251 21213914
chr17 27073254 27073263 TFAP2A JASPAR yes 27071002 2252 21213915
SNPs associated with TRAF4[ENSG00000076604.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 26828497 rs2191090 A G 242505 Esophagus 6.48687e-05 4812516
chr17 27322231 rs11651505 C T 244257 Heart 0.326062 4814250
chr17 27065211 rs3809797 T C 5791 Thyroid 0.151311 4813012
chr17 27295547 rs78265409 A G 217573 Liver 0.281607 4814078
Details of TRAF4[ENSG00000076604.10]
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Genomic Location chr17:27071002-27077974[+]
TSS 27071002
Gene Name TRAF4
Ensembl ID ENSG00000076604.10
ENTREZID 9618
Uniprot
A0A024QZ19
Q9BUZ4
A0A024QZ59
Protein Name
isoform CRA_a
isoform CRA_b
TNF receptor-associated factor 4
TNF receptor-associated factor 4
TNF receptor-associated factor 4
Expression levels of TRAF4[ENSG00000076604.10]
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