EnhancerDB
  1. Home
  2. Gene
  3. GTF3C1[ENSG00000077235.13]
Enhancers that regulate GTF3C1[ENSG00000077235.13]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 27464705 27470835 enh47941 27561234 90399
Prostate (RWPE1) Esophagus Liver Muscle (A673) Spleen Thymus Stomach
chr16 27479742 27486412 enh31755 27561234 74822
Muscle (Myoblast) Astrocyte Bone (Osteoblast)
chr16 27525082 27539775 enh44273 27561234 21459
Liver (HepG2) Lung Stomach Pancreas Spleen Muscle (Myotube) Uterus Thymus Heart
chr16 27532420 27532769 vista22282 27561234 28465
VISTA
chr16 27533512 27533805 vista22283 27561234 27429
VISTA
chr16 27541388 27541697 vista22284 27561234 19537
VISTA
chr16 27542863 27543251 vista22285 27561234 17983
VISTA
chr16 27543393 27543748 vista22286 27561234 17486
VISTA
chr16 27546889 27546978 vista22287 27561234 14256
VISTA
chr16 27570105 27574795 enh88232 27561234 8871
Pancreas Stomach
chr16 27575865 27584515 enh81100 27561234 14631
Bone Marrow (K562) Prostate (PC-3) Thyroid Lung (PC-9) Epithelial (MCF-7)
chr16 27577101 27577365 vista22288 27561234 15867
VISTA
chr16 27586105 27593357 enh31756 27561234 24871
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Thyroid Breast Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
chr16 27604845 27613875 enh88233 27561234 43611
Pancreas Thyroid Epithelial (MCF-7)
chr16 27618345 27627535 enh101467 27561234 57111
Thyroid
chr16 27620703 27620731 vista22289 27561234 59469
VISTA
chr16 27633125 27639895 enh52251 27561234 71891
Liver (HepG2) Brain (SK-N-SH) Large Intestine Stomach Thyroid Pancreas Heart
chr16 27644267 27653719 enh62549 27561234 83033
Esophagus Bone (Osteoblast) Epithelial (MCF-7)
Transcript facotrs that regulate GTF3C1[ENSG00000077235.13]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GTF3C1[ENSG00000077235.13], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 27652197 rs233460 A C 90963 Esophagus 4.94825e-14 4397216
chr16 28289685 rs149738934 C A 728451 Heart 0.172558 4399261
chr16 27063043 rs11647556 G T 407833 Pancreas 0.0181613 4393031
chr16 28541124 rs12448270 C T 979890 Spleen 0.407963 4399904
Details of GTF3C1[ENSG00000077235.13]
Back to top
Genomic Location chr16:27470876-27561234[-]
TSS 27561234
Gene Name GTF3C1
Ensembl ID ENSG00000077235.13
ENTREZID 2975
Uniprot
Q12789
Protein Name
GTF3C1 protein
General transcription factor 3C polypeptide 1
Expression levels of GTF3C1[ENSG00000077235.13]
Back to top