EnhancerDB
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Enhancers that regulate C3orf18[ENSG00000088543.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 50508565 50513435 enh107931 50608458 95023
Blood (T-cell)
chr3 50510468 50510743 vista40914 50608458 97715
VISTA
chr3 50515742 50524555 enh94508 50608458 83903
Spleen Brain (SK-N-SH) Blood (T-cell) Brain (SK-N-MC)
chr3 50528651 50536584 enh61053 50608458 71874
Blood (OCI-LY7) Embryonic Stem Cell Line (H1-hESC)
chr3 50548368 50556175 enh20592 50608458 52283
Brain (SK-N-SH) Ovary Large Intestine Placenta Thyroid Uterus Heart
chr3 50560725 50565675 enh54126 50608458 42783
Large Intestine
chr3 50567565 50579615 enh20593 50608458 28843
Bone Marrow (K562) Brain (SK-N-SH) Prostate (RWPE1) Thyroid Placenta
chr3 50585605 50591155 enh20594 50608458 17303
Placenta Ovary Prostate (RWPE1)
chr3 50610940 50611501 vista40915 50608458 2482
VISTA
chr3 50625949 50626261 vista40916 50608458 17491
VISTA
chr3 50627976 50628161 vista40917 50608458 19518
VISTA
chr3 50628296 50628501 vista40918 50608458 19838
VISTA
chr3 50629910 50630235 vista40919 50608458 21452
VISTA
chr3 50634565 50642566 enh20595 50608458 26107
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 50636478 50640158 vista1116 50608458 28020
VISTA
chr3 50638353 50638905 vista40920 50608458 29895
VISTA
chr3 50639096 50639152 vista40921 50608458 30638
VISTA
chr3 50639346 50639782 vista40922 50608458 30888
VISTA
chr3 50642550 50642869 vista40923 50608458 34092
VISTA
chr3 50643029 50643593 vista40924 50608458 34571
VISTA
chr3 50650716 50650897 vista40925 50608458 42258
VISTA
chr3 50655885 50677724 enh20596 50608458 47427
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Heart
chr3 50657930 50658131 vista40926 50608458 49472
VISTA
chr3 50664800 50665228 vista40927 50608458 56342
VISTA
chr3 50667799 50667847 vista40928 50608458 59341
VISTA
chr3 50683732 50692592 enh65654 50608458 75274
Spleen Colon (HCT116) Prostate (RWPE1) Heart
chr3 50698905 50703835 enh101733 50608458 90447
Thyroid Cervix (HeLa-S3)
Transcript facotrs that regulate C3orf18[ENSG00000088543.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 50610944 50610959 HNF4A JASPAR yes 50608458 2486 70981653
chr3 50610945 50610959 NR2F1 JASPAR yes 50608458 2487 70981654
chr3 50610945 50610960 HNF4G JASPAR yes 50608458 2487 70981655
chr3 50610956 50610970 PLAG1 JASPAR yes 50608458 2498 70981656
chr3 50610957 50610968 USF1 JASPAR yes 50608458 2499 70981657
chr3 50610957 50610968 USF2 JASPAR yes 50608458 2499 70981658
chr3 50610957 50610971 PLAG1 JASPAR yes 50608458 2499 70981659
chr3 50610958 50610968 MAX JASPAR yes 50608458 2500 70981660
chr3 50610982 50610996 TLX1 JASPAR yes 50608458 2524 70981661
chr3 50611014 50611035 ZNF263 JASPAR yes 50608458 2556 70981662
chr3 50611015 50611025 SP1 JASPAR yes 50608458 2557 70981663
chr3 50611017 50611022 SP1 TRANSFAC yes 50608458 2559 70981664
chr3 50611018 50611028 SREBF1 JASPAR yes 50608458 2560 70981665
chr3 50611018 50611028 SREBF2 JASPAR yes 50608458 2560 70981666
chr3 50611021 50611031 SP1 JASPAR yes 50608458 2563 70981667
chr3 50611040 50611045 NFY TRANSFAC yes 50608458 2582 70981668
chr3 50611049 50611059 ID4 JASPAR yes 50608458 2591 70981669
chr3 50611049 50611059 TCF3 JASPAR yes 50608458 2591 70981670
chr3 50611049 50611059 TCF4 JASPAR yes 50608458 2591 70981671
chr3 50611075 50611079 YY1 TRANSFAC yes 50608458 2617 70981672
chr3 50611075 50611090 STAT1 JASPAR yes 50608458 2617 70981673
chr3 50611077 50611088 STAT1 JASPAR yes 50608458 2619 70981674
chr3 50611102 50611106 H1TF2 TRANSFAC yes 50608458 2644 70981675
chr3 50611102 50611106 NFE TRANSFAC yes 50608458 2644 70981676
chr3 50611102 50611106 SRF TRANSFAC yes 50608458 2644 70981677
chr3 50611113 50611128 ZIC3 JASPAR yes 50608458 2655 70981678
chr3 50611143 50611155 HINFP JASPAR yes 50608458 2685 70981679
chr3 50611144 50611158 CREB3 JASPAR yes 50608458 2686 70981680
chr3 50611144 50611158 CREB3L1 JASPAR yes 50608458 2686 70981681
chr3 50611145 50611159 XBP1 JASPAR yes 50608458 2687 70981682
chr3 50611152 50611167 TFAP2A JASPAR yes 50608458 2694 70981683
chr3 50611196 50611210 TCF7L2 JASPAR yes 50608458 2738 70981684
chr3 50611200 50611206 TCF4 TRANSFAC yes 50608458 2742 70981685
chr3 50611213 50611222 NKX2-8 JASPAR yes 50608458 2755 70981686
chr3 50611233 50611245 HES5 JASPAR yes 50608458 2775 70981687
chr3 50611233 50611245 HES7 JASPAR yes 50608458 2775 70981688
chr3 50611234 50611245 USF2 JASPAR yes 50608458 2776 70981689
chr3 50611235 50611245 MAX JASPAR yes 50608458 2777 70981690
chr3 50611239 50611248 HIC2 JASPAR yes 50608458 2781 70981691
chr3 50611244 50611262 IRF2 JASPAR yes 50608458 2786 70981692
chr3 50611245 50611266 IRF1 JASPAR yes 50608458 2787 70981693
chr3 50611247 50611262 STAT2 JASPAR yes 50608458 2789 70981694
chr3 50611248 50611262 STAT1 JASPAR yes 50608458 2790 70981695
chr3 50611249 50611263 IRF7 JASPAR yes 50608458 2791 70981696
chr3 50611249 50611264 IRF9 JASPAR yes 50608458 2791 70981697
chr3 50611254 50611258 YY1 TRANSFAC yes 50608458 2796 70981698
chr3 50611258 50611273 TFAP2A JASPAR yes 50608458 2800 70981699
chr3 50611258 50611273 TFAP2C JASPAR yes 50608458 2800 70981700
chr3 50611265 50611283 RARA JASPAR yes 50608458 2807 70981701
chr3 50611280 50611295 TFAP2C JASPAR yes 50608458 2822 70981702
chr3 50611281 50611300 REST JASPAR yes 50608458 2823 70981703
chr3 50611282 50611294 INSM1 JASPAR yes 50608458 2824 70981704
chr3 50611311 50611321 RELA JASPAR yes 50608458 2853 70981705
chr3 50611320 50611332 INSM1 JASPAR yes 50608458 2862 70981706
chr3 50611326 50611336 TBX21 JASPAR yes 50608458 2868 70981707
chr3 50611326 50611337 TBX20 JASPAR yes 50608458 2868 70981708
chr3 50611326 50611337 TBX2 JASPAR yes 50608458 2868 70981709
chr3 50611326 50611339 EOMES JASPAR yes 50608458 2868 70981710
chr3 50611327 50611335 MGA JASPAR yes 50608458 2869 70981711
chr3 50611327 50611335 TBX15 JASPAR yes 50608458 2869 70981712
chr3 50611327 50611335 TBX1 JASPAR yes 50608458 2869 70981713
chr3 50611327 50611335 TBX4 JASPAR yes 50608458 2869 70981714
chr3 50611327 50611335 TBX5 JASPAR yes 50608458 2869 70981715
chr3 50611327 50611337 TBR1 JASPAR yes 50608458 2869 70981716
chr3 50611345 50611359 ZIC1 JASPAR yes 50608458 2887 70981717
chr3 50611390 50611408 NFYA JASPAR yes 50608458 2932 70981718
chr3 50611393 50611409 NFYA JASPAR yes 50608458 2935 70981719
chr3 50611396 50611409 DUXA JASPAR yes 50608458 2938 70981720
chr3 50611396 50611411 NFYB JASPAR yes 50608458 2938 70981721
chr3 50611397 50611408 DUX4 JASPAR yes 50608458 2939 70981722
chr3 50611398 50611403 NFY TRANSFAC yes 50608458 2940 70981723
chr3 50611434 50611440 NFE2 TRANSFAC yes 50608458 2976 70981724
chr3 50611450 50611456 YY1 JASPAR yes 50608458 2992 70981725
chr3 50611474 50611478 LFA1 TRANSFAC yes 50608458 3016 70981726
chr3 50611475 50611484 NKX3-2 JASPAR yes 50608458 3017 70981727
chr3 50611476 50611484 ISL2 JASPAR yes 50608458 3018 70981728
SNPs associated with C3orf18[ENSG00000088543.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 50672500 rs147064444 G A 64042 Esophagus 0.247517 6730045
chr3 50531201 rs6792502 C A,T 64261 Esophagus 0.0350524 6729380
chr3 50283437 rs7645537 T C 312025 Ovary 0.292218 6728276
chr3 51422904 rs72945708 C G 814446 Uterus 0.41257 6731271
Details of C3orf18[ENSG00000088543.10]
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Genomic Location chr3:50595462-50608458[-]
TSS 50608458
Gene Name C3orf18
Ensembl ID ENSG00000088543.10
ENTREZID 51161
Uniprot
Q6ZP18
Q9UK00
Protein Name
isoform CRA_a
Chromosome 3 open reading frame 18
Uncharacterized protein C3orf18
Expression levels of C3orf18[ENSG00000088543.10]
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