EnhancerDB
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Enhancers that regulate CRX[ENSG00000105392.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 48219685 48232735 enh18128 48322703 89968
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
chr19 48226445 48226596 vista29716 48322703 96107
VISTA
chr19 48264225 48275895 enh92843 48322703 46808
Liver (HepG2) Ovary Spleen Uterus Stomach
chr19 48277326 48277623 vista29717 48322703 45080
VISTA
chr19 48288002 48296028 enh62737 48322703 26675
Prostate (RWPE1) Esophagus Colon (HCT116) Muscle (Myoblast) Uterus Stomach
chr19 48293591 48293754 vista29718 48322703 28949
VISTA
chr19 48301309 48301509 vista29719 48322703 21194
VISTA
chr19 48302247 48302447 vista29720 48322703 20256
VISTA
chr19 48323234 48323499 vista29721 48322703 531
VISTA
chr19 48349977 48355103 enh86330 48322703 27274
Colon (HCT116)
chr19 48352522 48352636 vista29722 48322703 29819
VISTA
chr19 48359545 48368895 enh86331 48322703 36842
Spleen Colon (HCT116) Cervix (HeLa-S3)
chr19 48392365 48402355 enh52905 48322703 69662
Liver (HepG2) Large Intestine
chr19 48395340 48395779 vista29723 48322703 72637
VISTA
Transcript facotrs that regulate CRX[ENSG00000105392.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 48318908 48323338 ZBTB33 GTRD no Lung (A549) 48322703 635 108420966
chr19 48319417 48323274 ZBTB33 GTRD no Lung (A549) 48322703 571 108420967
chr19 48319564 48323396 ZBTB33 GTRD no Lung (A549) 48322703 693 108420968
chr19 48319615 48323361 ZBTB33 GTRD no Lung (A549) 48322703 658 108420969
chr19 48319648 48323273 ZNF274 GTRD no Blood (GM12878) 48322703 570 108420970
chr19 48321174 48323253 ZBTB33 GTRD no Lung (A549) 48322703 550 108420971
chr19 48321200 48323357 ZBTB33 GTRD no Lung (A549) 48322703 654 108420972
chr19 48321244 48323325 ZNF274 GTRD no Blood (GM12878) 48322703 622 108420973
chr19 48321338 48323263 ZNF274 GTRD no Cervix (HeLa-S3) 48322703 560 108420974
chr19 48322446 48323251 ZNF274 GTRD no Bone Marrow (K562) 48322703 257 108420975
chr19 48322935 48323571 TCF7L2 GTRD no Colon (HCT116) 48322703 232 108420976
chr19 48323144 48323454 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 48322703 441 108420977
chr19 48323160 48323484 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 48322703 457 108420978
chr19 48323172 48323428 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 48322703 469 108420979
chr19 48323218 48323398 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 48322703 515 108420980
chr19 48323234 48323246 PKNOX1 JASPAR yes 48322703 531 70864324
chr19 48323234 48323246 PKNOX2 JASPAR yes 48322703 531 70864325
chr19 48323234 48323246 TGIF2 JASPAR yes 48322703 531 70864326
chr19 48323240 48323244 NFE TRANSFAC yes 48322703 537 70864327
chr19 48323279 48323294 ZIC3 JASPAR yes 48322703 576 70864328
chr19 48323279 48323294 ZIC4 JASPAR yes 48322703 576 70864329
chr19 48323280 48323294 GLIS2 JASPAR yes 48322703 577 70864330
chr19 48323280 48323294 ZIC1 JASPAR yes 48322703 577 70864331
chr19 48323284 48323304 RREB1 JASPAR yes 48322703 581 70864332
chr19 48323287 48323301 PLAG1 JASPAR yes 48322703 584 70864333
chr19 48323287 48323308 ZNF263 JASPAR yes 48322703 584 70864334
chr19 48323290 48323302 INSM1 JASPAR yes 48322703 587 70864335
chr19 48323295 48323305 SP1 JASPAR yes 48322703 592 70864336
chr19 48323295 48323316 ZNF263 JASPAR yes 48322703 592 70864337
chr19 48323296 48323317 ZNF263 JASPAR yes 48322703 593 70864338
chr19 48323297 48323303 MAZ TRANSFAC yes 48322703 594 70864339
chr19 48323297 48323308 E2F6 JASPAR yes 48322703 594 70864340
chr19 48323298 48323319 ZNF263 JASPAR yes 48322703 595 70864341
chr19 48323299 48323320 ZNF263 JASPAR yes 48322703 596 70864342
chr19 48323302 48323312 SP1 JASPAR yes 48322703 599 70864343
chr19 48323302 48323323 ZNF263 JASPAR yes 48322703 599 70864344
chr19 48323308 48323323 PRDM1 JASPAR yes 48322703 605 70864345
chr19 48323314 48323332 E2F3 JASPAR yes 48322703 611 70864346
chr19 48323333 48323351 ESR2 JASPAR yes 48322703 630 70864347
chr19 48323333 48323472 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 48322703 630 108420981
chr19 48323334 48323349 ESR2 JASPAR yes 48322703 631 70864348
chr19 48323342 48323353 NFE2L2 JASPAR yes 48322703 639 70864349
chr19 48323345 48323355 SP1 JASPAR yes 48322703 642 70864350
chr19 48323359 48323369 GSC JASPAR yes 48322703 656 70864351
chr19 48323372 48323392 RREB1 JASPAR yes 48322703 669 70864352
chr19 48323374 48323394 RREB1 JASPAR yes 48322703 671 70864353
chr19 48323376 48323396 RREB1 JASPAR yes 48322703 673 70864354
chr19 48323378 48323398 RREB1 JASPAR yes 48322703 675 70864355
chr19 48323382 48323402 RREB1 JASPAR yes 48322703 679 70864356
chr19 48323405 48323417 FOXI1 JASPAR yes 48322703 702 70864357
chr19 48323414 48323431 RXRA JASPAR yes 48322703 711 70864358
chr19 48323418 48323439 IRF1 JASPAR yes 48322703 715 70864359
chr19 48323419 48323430 ELF5 JASPAR yes 48322703 716 70864360
chr19 48323420 48323430 ETV6 JASPAR yes 48322703 717 70864361
chr19 48323422 48323427 ETS2 TRANSFAC yes 48322703 719 70864362
chr19 48323422 48323436 STAT1 JASPAR yes 48322703 719 70864363
chr19 48323422 48323437 PRDM1 JASPAR yes 48322703 719 70864364
chr19 48323422 48323437 STAT2 JASPAR yes 48322703 719 70864365
chr19 48323422 48323440 IRF2 JASPAR yes 48322703 719 70864366
chr19 48323423 48323435 IRF1 JASPAR yes 48322703 720 70864367
chr19 48323423 48323441 ESR1 JASPAR yes 48322703 720 70864368
chr19 48323434 48323451 RARA JASPAR yes 48322703 731 70864369
chr19 48323437 48323451 PLAG1 JASPAR yes 48322703 734 70864370
chr19 48323491 48323947 ZNF274 GTRD no Bone Marrow (K562) 48322703 788 108420982
SNPs associated with CRX[ENSG00000105392.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of CRX[ENSG00000105392.11]
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Genomic Location chr19:48322703-48346587[+]
TSS 48322703
Gene Name CRX
Ensembl ID ENSG00000105392.11
ENTREZID 1406
Uniprot
O43186
Protein Name
Cone-rod homeobox protein
Expression levels of CRX[ENSG00000105392.11]
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