EnhancerDB
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Enhancers that regulate GRIK5[ENSG00000105737.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr19 42474765 42479255 enh112603 42573650 94395
Brain (SK-N-MC)
chr19 42493914 42494230 vista29459 42573650 79420
VISTA
chr19 42500174 42500445 vista29460 42573650 73205
VISTA
chr19 42501283 42501478 vista29461 42573650 72172
VISTA
chr19 42512525 42516740 enh44662 42573650 56910
Muscle (A673) Muscle (Myotube) Brain (SK-N-MC)
chr19 42514619 42514744 vista29462 42573650 58906
VISTA
chr19 42519245 42525254 enh81519 42573650 48396
Bone Marrow (K562) Prostate (PC-3) Bone (Osteoblast)
chr19 42525339 42531237 enh65191 42573650 42413
Bone (Osteoblast) Heart
chr19 42527414 42527647 vista29463 42573650 46003
VISTA
chr19 42532310 42532673 vista29464 42573650 40977
VISTA
chr19 42534668 42546509 enh44663 42573650 27141
Prostate (PC-3) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr19 42551214 42555628 enh58853 42573650 18022
Esophagus Skin (Keratinocyte)
chr19 42571588 42571990 vista29465 42573650 1660
VISTA
chr19 42591605 42598795 enh5151 42573650 17955
Blood (Karpas-422)
chr19 42604365 42608515 enh5152 42573650 30715
Blood (Karpas-422)
chr19 42606774 42607144 vista29466 42573650 33124
VISTA
chr19 42613518 42620839 enh5153 42573650 39868
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Stomach
chr19 42618693 42618808 vista29467 42573650 45043
VISTA
chr19 42628733 42636506 enh32943 42573650 55083
Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Muscle (Myotube)
chr19 42633561 42634224 vista29468 42573650 59911
VISTA
chr19 42634554 42634824 vista29469 42573650 60904
VISTA
chr19 42637281 42642395 enh60766 42573650 63631
Blood (OCI-LY7)
chr19 42652605 42661475 enh48195 42573650 78955
Pancreas Thymus
chr19 42654657 42654924 vista29470 42573650 81007
VISTA
chr19 42668605 42678635 enh44664 42573650 94955
Prostate (PC-3) Muscle (Myotube) Lung (PC-9)
Transcript facotrs that regulate GRIK5[ENSG00000105737.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr19 42571589 42571593 TEAD2 TRANSFAC yes 42573650 2057 70850578
chr19 42571594 42571605 FOXH1 JASPAR yes 42573650 2045 70850579
chr19 42571595 42571601 ZNF354C JASPAR yes 42573650 2049 70850580
chr19 42571595 42571605 GSC2 JASPAR yes 42573650 2045 70850581
chr19 42571595 42571605 GSC JASPAR yes 42573650 2045 70850582
chr19 42571596 42571604 RHOXF1 JASPAR yes 42573650 2046 70850583
chr19 42571596 42571605 PITX3 JASPAR yes 42573650 2045 70850584
chr19 42571631 42571647 ZNF143 JASPAR yes 42573650 2003 70850585
chr19 42571651 42571672 ZNF263 JASPAR yes 42573650 1978 70850586
chr19 42571666 42571676 SP1 JASPAR yes 42573650 1974 70850587
chr19 42571672 42571683 TBX20 JASPAR yes 42573650 1967 70850588
chr19 42571681 42571687 SP1 TRANSFAC yes 42573650 1963 70850589
chr19 42571682 42571687 SP1 TRANSFAC yes 42573650 1963 70850590
chr19 42571692 42571705 SMAD2 JASPAR yes 42573650 1945 70850591
chr19 42571694 42571715 ZNF263 JASPAR yes 42573650 1935 70850592
chr19 42571710 42571721 FOSL2 JASPAR yes 42573650 1929 70850593
chr19 42571713 42571719 ESR1 TRANSFAC yes 42573650 1931 70850594
chr19 42571713 42571730 ESR1 JASPAR yes 42573650 1920 70850595
chr19 42571713 42571731 ESR2 JASPAR yes 42573650 1919 70850596
chr19 42571715 42571719 ESR1 TRANSFAC yes 42573650 1931 70850597
chr19 42571743 42571747 LFA1 TRANSFAC yes 42573650 1903 70850598
chr19 42571752 42571767 HNF4G JASPAR yes 42573650 1883 70850599
chr19 42571753 42571768 HNF4A JASPAR yes 42573650 1882 70850600
chr19 42571759 42571774 HNF4G JASPAR yes 42573650 1876 70850601
chr19 42571759 42571780 ZNF263 JASPAR yes 42573650 1870 70850602
chr19 42571760 42571775 HNF4A JASPAR yes 42573650 1875 70850603
chr19 42571764 42571770 SOX10 JASPAR yes 42573650 1880 70850604
chr19 42571767 42571782 AR JASPAR yes 42573650 1868 70850605
chr19 42571784 42571805 ZNF263 JASPAR yes 42573650 1845 70850606
chr19 42571792 42571810 RARA JASPAR yes 42573650 1840 70850607
chr19 42571807 42571821 PLAG1 JASPAR yes 42573650 1829 70850608
chr19 42571808 42571827 CTCF JASPAR yes 42573650 1823 70850609
chr19 42571809 42571822 SCRT2 JASPAR yes 42573650 1828 70850610
chr19 42571809 42571824 SCRT1 JASPAR yes 42573650 1826 70850611
chr19 42571809 42571824 ZIC4 JASPAR yes 42573650 1826 70850612
chr19 42571813 42571822 SNAI2 JASPAR yes 42573650 1828 70850613
chr19 42571816 42571829 SMAD2 JASPAR yes 42573650 1821 70850614
chr19 42571822 42571835 SCRT2 JASPAR yes 42573650 1815 70850615
chr19 42571829 42571837 TBX15 JASPAR yes 42573650 1813 70850616
chr19 42571830 42571835 SP1 TRANSFAC yes 42573650 1815 70850617
chr19 42571834 42571855 ZNF263 JASPAR yes 42573650 1795 70850618
chr19 42571839 42571854 PRDM1 JASPAR yes 42573650 1796 70850619
chr19 42571843 42571864 ZNF263 JASPAR yes 42573650 1786 70850620
chr19 42571852 42571867 NR2C2 JASPAR yes 42573650 1783 70850621
chr19 42571853 42571867 RXRB JASPAR yes 42573650 1783 70850622
chr19 42571855 42571876 ZNF263 JASPAR yes 42573650 1774 70850623
chr19 42571862 42571866 LFA1 TRANSFAC yes 42573650 1784 70850624
chr19 42571866 42571875 SNAI2 JASPAR yes 42573650 1775 70850625
chr19 42571866 42571876 FIGLA JASPAR yes 42573650 1774 70850626
chr19 42571866 42571876 TCF3 JASPAR yes 42573650 1774 70850627
chr19 42571936 42571949 SMAD2 JASPAR yes 42573650 1701 70850628
chr19 42571958 42571969 NFE2L2 JASPAR yes 42573650 1681 70850629
chr19 42571984 42571988 LFA1 TRANSFAC yes 42573650 1662 70850630
SNPs associated with GRIK5[ENSG00000105737.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of GRIK5[ENSG00000105737.5]
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Genomic Location chr19:42502473-42573650[-]
TSS 42573650
Gene Name GRIK5
Ensembl ID ENSG00000105737.5
ENTREZID 2901
Uniprot
Q16478
Protein Name
kainate 5
Glutamate receptor ionotropic
Expression levels of GRIK5[ENSG00000105737.5]
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