EnhancerDB
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Enhancers that regulate HPCA[ENSG00000121905.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 33250605 33259715 enh78996 33351595 91880
Prostate (PC-3) Cervix (HeLa-S3)
chr1 33261105 33269255 enh78997 33351595 82340
Prostate (PC-3) Blood (T-cell) Lung (PC-9)
chr1 33277945 33282115 enh87591 33351595 69480
Pancreas Cervix (HeLa-S3)
chr1 33284832 33285123 vista1123 33351595 66472
VISTA
chr1 33373602 33373851 vista1124 33351595 22007
VISTA
chr1 33374505 33393655 enh11729 33351595 22910
Brain (SK-N-MC) Large Intestine Thyroid Placenta Muscle (Myoblast)
chr1 33378487 33378646 vista1125 33351595 26892
VISTA
chr1 33395720 33407455 enh214 33351595 44125
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Uterus Epithelial (MCF-7)
chr1 33405191 33405597 vista1126 33351595 53596
VISTA
chr1 33412495 33428675 enh215 33351595 60900
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus
chr1 33427851 33428169 vista1127 33351595 76256
VISTA
chr1 33428474 33429020 vista1128 33351595 76879
VISTA
chr1 33433896 33434020 vista1129 33351595 82301
VISTA
chr1 33438571 33438703 vista1130 33351595 86976
VISTA
chr1 33442929 33472683 enh216 33351595 91334
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr1 33446816 33447482 vista1131 33351595 95221
VISTA
chr1 33447667 33447707 vista1132 33351595 96072
VISTA
chr1 33448758 33448929 vista1133 33351595 97163
VISTA
chr1 33450112 33450483 vista1134 33351595 98517
VISTA
chr1 33450600 33450837 vista1135 33351595 99005
VISTA
Transcript facotrs that regulate HPCA[ENSG00000121905.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with HPCA[ENSG00000121905.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 33436032 rs72654084 T A 71990 Esophagus 0.190029 221215
chr1 33471080 rs116748149 T C 107038 Heart 0.13703 221528
chr1 32358697 rs681761 C G 992898 Breast 0.239028 215529
chr1 32810649 rs139084749 C T 540946 Ovary 0.0263024 218001
chr1 32944767 rs55796835 GTGATATGATA G 406828 Uterus 0.183762 218701
chr1 33391176 rs494656 A C 27134 Thyroid 0.0039505 220780
chr1 32443326 rs56189421 G C 908269 Lung 0.0801381 216263
Details of HPCA[ENSG00000121905.5]
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Genomic Location chr1:33351595-33364042[+]
TSS 33351595
Gene Name HPCA
Ensembl ID ENSG00000121905.5
ENTREZID 3208
Uniprot
P84074
Protein Name
Hippocalcin
Neuron-specific calcium-binding protein hippocalcin
Expression levels of HPCA[ENSG00000121905.5]
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