EnhancerDB
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  3. SRRM1[ENSG00000133226.12]
Enhancers that regulate SRRM1[ENSG00000133226.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 24867645 24876136 enh11620 24958207 82071
Prostate (PC-3) Blood (OCI-LY7) Placenta Lung (PC-9) Stomach
chr1 24878735 24879052 vista786 24958207 79155
VISTA
chr1 24883605 24896815 enh11621 24958207 61392
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
chr1 24890021 24890356 vista787 24958207 67851
VISTA
chr1 24900845 24905015 enh87585 24958207 53192
Pancreas Stomach
chr1 24908745 24915935 enh64011 24958207 42272
Liver (HepG2) Peripheral Blood (MM.1S) Heart Blood (T-cell) Stomach
chr1 24916485 24926855 enh11622 24958207 31352
Prostate (PC-3) Placenta Epithelial (MCF-7)
chr1 24944005 24951015 enh11623 24958207 7192
Pancreas Placenta
chr1 24968619 24968979 vista788 24958207 10412
VISTA
chr1 24970685 24970736 vista789 24958207 12478
VISTA
chr1 25002143 25025115 enh11624 24958207 43936
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1 25011612 25011937 vista790 24958207 53405
VISTA
chr1 25021969 25022194 vista791 24958207 63762
VISTA
chr1 25026945 25066186 enh139 24958207 68738
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 25051079 25051208 vista792 24958207 92872
VISTA
chr1 25051605 25051987 vista793 24958207 93398
VISTA
Transcript facotrs that regulate SRRM1[ENSG00000133226.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SRRM1[ENSG00000133226.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 24951119 rs11249147 A G 7088 Esophagus 0.000217078 166813
chr1 25306442 rs71652346 G A 306684 Esophagus 0.203587 170082
chr1 24879226 rs61776460 A G 78981 Pancreas 0.317037 166092
chr1 25222945 rs9438874 G A 223187 Breast 0.126193 169100
chr1 24230388 rs74967924 G A 727819 Ovary 0.219829 161963
chr1 25895806 rs78679676 C T 896048 Thyroid 0.00716562 173932
chr1 24637463 rs41268747 A G 320744 Lung 0.267531 164832
chr1 25357367 rs11582679 C T 357609 Adrenal 0.208281 170629
Details of SRRM1[ENSG00000133226.12]
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Genomic Location chr1:24958207-24999758[+]
TSS 24958207
Gene Name SRRM1
Ensembl ID ENSG00000133226.12
ENTREZID 10250
Uniprot
A0A0S2Z4Z6
A0A0S2Z4W1
Q8IYB3
B7Z7U0
Protein Name
Serine/arginine repetitive matrix 1 isoform 1
Serine/arginine repetitive matrix 1 isoform 2
Serine/arginine repetitive matrix protein 1
Expression levels of SRRM1[ENSG00000133226.12]
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