EnhancerDB
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  3. PRPF38B[ENSG00000134186.7]
Enhancers that regulate PRPF38B[ENSG00000134186.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 109131125 109141135 enh27056 109234945 93810
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Lung Stomach Muscle (A673) Muscle (Myoblast) Spleen Uterus Thymus Heart
chr1 109150165 109154453 enh64090 109234945 80492
Thyroid Heart
chr1 109156863 109156955 vista2829 109234945 77990
VISTA
chr1 109159407 109159722 vista2830 109234945 75223
VISTA
chr1 109186500 109190755 enh92093 109234945 44190
Liver (HepG2) Stomach
chr1 109188271 109188477 vista2831 109234945 46468
VISTA
chr1 109189516 109189718 vista2832 109234945 45227
VISTA
chr1 109220525 109226523 enh67099 109234945 8422
Peripheral Blood (MM.1S) Neural Stem Cells (H9)
chr1 109240465 109250095 enh27057 109234945 5520
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Blood (T-cell)
chr1 109246671 109246905 vista2833 109234945 11726
VISTA
chr1 109259525 109263675 enh74363 109234945 24580
Muscle (A673)
chr1 109262615 109262764 vista2834 109234945 27670
VISTA
Transcript facotrs that regulate PRPF38B[ENSG00000134186.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with PRPF38B[ENSG00000134186.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 110068230 rs11584134 A G 823805 Esophagus 0.131983 546748
chr1 108591103 rs189888096 G C 643842 Esophagus 0.0403619 541083
chr1 108600490 rs78362906 C T 634455 Esophagus 0.298332 541207
chr1 109820590 rs617224 T C 576165 Heart 0.306185 546009
chr1 108331061 rs61797407 T C 903884 Heart 0.0245222 539259
chr1 108269173 rs183606276 C G 965772 Spleen 0.44433 538974
chr1 109910013 rs11581665 C T 665588 Thyroid 0.157845 546199
Details of PRPF38B[ENSG00000134186.7]
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Genomic Location chr1:109234945-109244425[+]
TSS 109234945
Gene Name PRPF38B
Ensembl ID ENSG00000134186.7
ENTREZID 55119
Uniprot
Q69YH0
Q5VTL8
Protein Name
PRP38 pre-mRNA processing factor 38
PRPF38B protein
Pre-mRNA-splicing factor 38B
Expression levels of PRPF38B[ENSG00000134186.7]
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