EnhancerDB
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Enhancers that regulate PUM1[ENSG00000134644.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 31436885 31441035 enh109302 31538838 97803
Stomach
chr1 31445485 31452335 enh26608 31538838 86503
Liver (HepG2) Astrocyte Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Epithelial (MCF-7)
chr1 31453885 31463675 enh49699 31538838 75163
Esophagus Lung Large Intestine Stomach
chr1 31468665 31477135 enh191 31538838 61703
Placenta Liver (HepG2) Blood (Karpas-422) Epithelial (MCF-7)
chr1 31478305 31488656 enh192 31538838 50182
Esophagus Astrocyte Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Stomach
chr1 31483120 31483355 vista1060 31538838 55483
VISTA
chr1 31490965 31495195 enh74180 31538838 43643
Muscle (A673) Stomach
chr1 31495565 31517775 enh193 31538838 21063
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
chr1 31504221 31504603 vista1061 31538838 34235
VISTA
chr1 31517703 31518005 vista1062 31538838 20833
VISTA
chr1 31518429 31527995 enh11703 31538838 10843
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Placenta Stomach
chr1 31537719 31538012 vista1063 31538838 826
VISTA
chr1 31543985 31548135 enh49700 31538838 5147
Large Intestine
chr1 31556005 31560155 enh90666 31538838 17167
Bone Marrow (K562)
chr1 31565865 31577728 enh11704 31538838 27027
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Lung (PC-9) Stomach Placenta Muscle (Myoblast) Pancreas Spleen Epithelial (MCF-7)
chr1 31581525 31587775 enh11705 31538838 42687
Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Esophagus Placenta Lung (PC-9) Pancreas
chr1 31591009 31602395 enh11706 31538838 52171
Esophagus Astrocyte Placenta Skin (Keratinocyte)
chr1 31602770 31603168 vista1064 31538838 63932
VISTA
chr1 31606885 31613915 enh11707 31538838 68047
Placenta Cervix (HeLa-S3)
chr1 31614545 31621835 enh11708 31538838 75707
Placenta
chr1 31622305 31630475 enh11709 31538838 83467
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Uterus Epithelial (MCF-7)
chr1 31625313 31625543 vista1065 31538838 86475
VISTA
chr1 31627566 31627958 vista1066 31538838 88728
VISTA
chr1 31628220 31628457 vista1067 31538838 89382
VISTA
chr1 31630785 31637857 enh11710 31538838 91947
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Placenta Epithelial (MCF-7)
Transcript facotrs that regulate PUM1[ENSG00000134644.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 31537604 31538044 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 31538838 794 107802718
chr1 31537729 31537741 MEF2A JASPAR yes 31538838 1097 118266044
chr1 31537729 31537741 MEF2D JASPAR yes 31538838 1097 118266045
chr1 31537732 31537747 SOX21 JASPAR yes 31538838 1091 118266046
chr1 31537746 31537751 GATA1 TRANSFAC yes 31538838 1087 118266047
chr1 31537770 31537783 NFKB2 JASPAR yes 31538838 1055 118266048
chr1 31537817 31537831 SPIC JASPAR yes 31538838 1007 118266049
chr1 31537822 31537827 ETS2 TRANSFAC yes 31538838 1011 118266050
chr1 31537828 31537848 RREB1 JASPAR yes 31538838 990 118266051
chr1 31537829 31537849 RREB1 JASPAR yes 31538838 989 118266052
chr1 31537834 31537854 RREB1 JASPAR yes 31538838 984 118266053
chr1 31537839 31537845 HiNF-A TRANSFAC yes 31538838 993 118266054
chr1 31537850 31537863 ELF3 JASPAR yes 31538838 975 118266055
chr1 31537854 31537860 ETS1 JASPAR yes 31538838 978 118266056
chr1 31537863 31537878 RUNX2 JASPAR yes 31538838 960 118266057
chr1 31537863 31537880 ESR1 JASPAR yes 31538838 958 118266058
chr1 31537901 31537912 ELF5 JASPAR yes 31538838 926 118266059
chr1 31537901 31537913 EHF JASPAR yes 31538838 925 118266060
chr1 31537901 31537913 ELF1 JASPAR yes 31538838 925 118266061
chr1 31537901 31537913 ELF4 JASPAR yes 31538838 925 118266062
chr1 31537901 31537914 ELF1 JASPAR yes 31538838 924 118266063
chr1 31537902 31537909 SPI1 JASPAR yes 31538838 929 118266064
chr1 31537902 31537910 EHF JASPAR yes 31538838 928 118266065
chr1 31537902 31537910 FEV JASPAR yes 31538838 928 118266066
chr1 31537925 31537929 YY1 TRANSFAC yes 31538838 909 118266067
chr1 31537965 31537980 HNF4G JASPAR yes 31538838 858 118266068
chr1 31537966 31537981 HNF4A JASPAR yes 31538838 857 118266069
chr1 31537997 31538008 CDX2 JASPAR yes 31538838 830 118266070
SNPs associated with PUM1[ENSG00000134644.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 32420159 rs681038 G C 881321 Esophagus 0.129659 216068
chr1 30745108 rs76106426 A G 659245 Esophagus 0.61713 202302
chr1 32061295 rs78196735 G A 522457 Esophagus 0.0460202 213736
chr1 31108321 rs79601144 G C 296032 Heart 0.294152 204387
chr1 31325027 rs947646 G C 79326 Pancreas 0.285524 207038
chr1 30745709 rs466653 C T 658644 Breast 0.324175 202314
chr1 31370604 rs35851714 G C 33749 Spleen 0.39962 207436
chr1 31113723 rs904255 G A 290630 Ovary 0.446271 204476
chr1 32015974 rs4949441 A G 477136 Thyroid 0.247867 213136
chr1 31000191 rs385109 G A,T 404162 Liver 0.20509 204106
chr1 30851428 rs78249861 G A 552925 Lung 0.158419 203126
chr1 31491500 rs6666710 A G 0 Adrenal 0.22855 208277
Details of PUM1[ENSG00000134644.11]
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Genomic Location chr1:31404353-31538838[-]
TSS 31538838
Gene Name PUM1
Ensembl ID ENSG00000134644.11
ENTREZID 9698
Uniprot
Q14671
Protein Name
Pumilio homolog 1
Expression levels of PUM1[ENSG00000134644.11]
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