EnhancerDB
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Enhancers that regulate SMPD2[ENSG00000135587.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 109652045 109675195 enh23490 109761966 86771
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-SH) Lung Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Spleen Heart
chr6 109672770 109673128 vista53072 109761966 88838
VISTA
chr6 109677625 109684275 enh9311 109761966 77691
Blood (Karpas-422)
chr6 109680867 109680881 vista53073 109761966 81085
VISTA
chr6 109740045 109747954 enh23491 109761966 14012
Prostate (PC-3) Placenta Prostate (RWPE1) Lung (PC-9)
chr6 109755732 109756057 vista53074 109761966 5909
VISTA
chr6 109777929 109785294 enh23492 109761966 15963
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus
chr6 109780095 109780443 vista53075 109761966 18129
VISTA
chr6 109797105 109801255 enh93529 109761966 35139
Liver (HepG2)
chr6 109805021 109805195 vista53076 109761966 43055
VISTA
chr6 109821545 109827200 enh23493 109761966 59579
Muscle (Myoblast) Muscle (Myotube) Placenta
chr6 109831185 109835335 enh84349 109761966 69219
Prostate (PC-3)
chr6 109852596 109852917 vista53077 109761966 90630
VISTA
Transcript facotrs that regulate SMPD2[ENSG00000135587.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SMPD2[ENSG00000135587.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 109681466 rs1074766 T C 80500 Esophagus 4.72557e-23 9253276
chr6 109750410 rs9487100 C T 11556 Pancreas 1.11034e-08 9253491
chr6 109673933 rs1040284 T C 88033 Lung 1.10372e-12 9253213
Details of SMPD2[ENSG00000135587.4]
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Genomic Location chr6:109761966-109765122[+]
TSS 109761966
Gene Name SMPD2
Ensembl ID ENSG00000135587.4
ENTREZID 6610
Uniprot
O60906
Protein Name
Sphingomyelin phosphodiesterase 2
Expression levels of SMPD2[ENSG00000135587.4]
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