EnhancerDB
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Enhancers that regulate HERC3[ENSG00000138641.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 89338705 89343322 enh87297 89442199 98877
Peripheral Blood (MM.1S) Blood (GM12878)
chr4 89368459 89368755 vista45368 89442199 73444
VISTA
chr4 89377235 89377564 vista45369 89442199 64635
VISTA
chr4 89400845 89404995 enh100220 89442199 37204
Uterus
chr4 89433703 89434055 vista45370 89442199 8144
VISTA
chr4 89438192 89438391 vista45371 89442199 3808
VISTA
chr4 89450890 89458815 enh36798 89442199 8691
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9)
chr4 89453548 89453843 vista45372 89442199 11349
VISTA
chr4 89454373 89454723 vista45373 89442199 12174
VISTA
chr4 89455158 89455345 vista45374 89442199 12959
VISTA
chr4 89466327 89466604 vista45375 89442199 24128
VISTA
chr4 89493233 89498641 enh45694 89442199 51034
Muscle (Myotube) Neural Stem Cells (H9) Uterus
chr4 89505165 89510755 enh111090 89442199 62966
Cervix (HeLa-S3)
chr4 89518585 89524075 enh36799 89442199 76386
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Uterus Blood (T-cell) Stomach
chr4 89524985 89541895 enh21676 89442199 82786
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr4 89534713 89535020 vista45376 89442199 92514
VISTA
chr4 89542195 89546761 enh36800 89442199 99996
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Lung (PC-9) Muscle (Myoblast)
Transcript facotrs that regulate HERC3[ENSG00000138641.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr4 89438195 89438213 IRF2 JASPAR yes 89442199 3986 49257530
chr4 89438196 89438217 IRF1 JASPAR yes 89442199 3982 49257531
chr4 89438200 89438214 IRF7 JASPAR yes 89442199 3985 49257532
chr4 89438223 89438226 MYB TRANSFAC yes 89442199 3973 49257533
chr4 89438230 89438243 NR2F1 JASPAR yes 89442199 3956 49257534
chr4 89438248 89438258 RORA JASPAR yes 89442199 3941 49257535
chr4 89438264 89438275 TFAP2A JASPAR yes 89442199 3924 49257536
chr4 89438264 89438275 TFAP2B JASPAR yes 89442199 3924 49257537
chr4 89438264 89438275 TFAP2C JASPAR yes 89442199 3924 49257538
chr4 89438288 89438302 POU4F1 JASPAR yes 89442199 3897 49257539
chr4 89438302 89438309 SPIB JASPAR yes 89442199 3890 49257540
chr4 89438308 89438311 MYB TRANSFAC yes 89442199 3888 49257541
chr4 89438325 89438329 TEAD2 TRANSFAC yes 89442199 3870 49257542
chr4 89438343 89438346 MYB TRANSFAC yes 89442199 3853 49257543
chr4 89438348 89438364 SRF JASPAR yes 89442199 3835 49257544
chr4 89438349 89438361 SRF JASPAR yes 89442199 3838 49257545
chr4 89438349 89438364 MEF2A JASPAR yes 89442199 3835 49257546
chr4 89438350 89438362 MEF2B JASPAR yes 89442199 3837 49257547
chr4 89438350 89438362 MEF2D JASPAR yes 89442199 3837 49257548
chr4 89438351 89438361 MEF2A JASPAR yes 89442199 3838 49257549
chr4 89438382 89438387 GATA1 TRANSFAC yes 89442199 3812 49257550
SNPs associated with HERC3[ENSG00000138641.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 88906039 rs55690413 CAGTT C 536160 Breast 0.244622 7674447
chr4 88656714 rs116165966 T G 785485 Liver 0.399489 7672963
Details of HERC3[ENSG00000138641.11]
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Genomic Location chr4:89442199-89629693[+]
TSS 89442199
Gene Name HERC3
Ensembl ID ENSG00000138641.11
ENTREZID 8916
Uniprot
Q15034
B4DK41
Protein Name
Probable E3 ubiquitin-protein ligase HERC3
Putative uncharacterized protein HERC3
Expression levels of HERC3[ENSG00000138641.11]
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